Gene : Medtr5g091110 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22807:SF34 - METHYLTRANSFERASE NSUN6-RELATED Description:  NOL1/NOP2/sun family protein
Genomic Order:  5207 Name:  ? Medtr5g091110
Secondary Identifier:  ? PAC:31088729
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g091110 0.5kb upstream 0.5kb upstream 10922 true chr5: 39695039-39705960 Medicago truncatula
Medtr5g091110 0.5kb upstream 0.5kb upstream 500 false chr5: 39705461-39705960 Medicago truncatula
Medtr5g091110 0.5kb downstream 0.5kb downstream 10922 true chr5: 39694539-39705460 Medicago truncatula
Medtr5g091110 0.5kb downstream 0.5kb downstream 500 false chr5: 39694539-39695038 Medicago truncatula
Medtr5g091110 1.0kb upstream 1.0kb upstream 11422 true chr5: 39695039-39706460 Medicago truncatula
Medtr5g091110 1.0kb upstream 1.0kb upstream 1000 false chr5: 39705461-39706460 Medicago truncatula
Medtr5g091110 1.0kb downstream 1.0kb downstream 11422 true chr5: 39694039-39705460 Medicago truncatula
Medtr5g091110 1.0kb downstream 1.0kb downstream 1000 false chr5: 39694039-39695038 Medicago truncatula
Medtr5g091110 2.0kb upstream 2.0kb upstream 12422 true chr5: 39695039-39707460 Medicago truncatula
Medtr5g091110 2.0kb upstream 2.0kb upstream 2000 false chr5: 39705461-39707460 Medicago truncatula
Medtr5g091110 2.0kb downstream 2.0kb downstream 12422 true chr5: 39693039-39705460 Medicago truncatula
Medtr5g091110 2.0kb downstream 2.0kb downstream 2000 false chr5: 39693039-39695038 Medicago truncatula
Medtr5g091110 5.0kb upstream 5.0kb upstream 15422 true chr5: 39695039-39710460 Medicago truncatula
Medtr5g091110 5.0kb upstream 5.0kb upstream 5000 false chr5: 39705461-39710460 Medicago truncatula
Medtr5g091110 5.0kb downstream 5.0kb downstream 15422 true chr5: 39690039-39705460 Medicago truncatula
Medtr5g091110 5.0kb downstream 5.0kb downstream 5000 false chr5: 39690039-39695038 Medicago truncatula
Medtr5g091110 10.0kb upstream 10.0kb upstream 20422 true chr5: 39695039-39715460 Medicago truncatula
Medtr5g091110 10.0kb upstream 10.0kb upstream 10000 false chr5: 39705461-39715460 Medicago truncatula
Medtr5g091110 10.0kb downstream 10.0kb downstream 20422 true chr5: 39685039-39705460 Medicago truncatula
Medtr5g091110 10.0kb downstream 10.0kb downstream 10000 false chr5: 39685039-39695038 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026330 5273 Angiosperm View MSA
122304185 5265 Fabidae View MSA
124064308 5270 Rosid View MSA
123740996 5271 Pentapetalae View MSA
122793735 5272 Eudicot View MSA
121346670 5274 Embryophyte View MSA
123427467 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.682        
cufflinks 0.989        
cufflinks 0.747        
cufflinks 0.526       Low
cufflinks 0.954        
cufflinks 0.489       Low
cufflinks 0.871        
cufflinks 0.857        
cufflinks 0.965        

0 Strain