Gene : Medtr5g092160 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12668:SF0 - UPF0136 MEMBRANE PROTEIN CG5532 Description:  transmembrane protein 14C
Genomic Order:  5291 Name:  ? Medtr5g092160
Secondary Identifier:  ? PAC:31088051
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g092160 0.5kb upstream 0.5kb upstream 2880 true chr5: 40245870-40248749 Medicago truncatula
Medtr5g092160 0.5kb upstream 0.5kb upstream 500 false chr5: 40248250-40248749 Medicago truncatula
Medtr5g092160 0.5kb downstream 0.5kb downstream 2880 true chr5: 40245370-40248249 Medicago truncatula
Medtr5g092160 0.5kb downstream 0.5kb downstream 500 false chr5: 40245370-40245869 Medicago truncatula
Medtr5g092160 1.0kb upstream 1.0kb upstream 3380 true chr5: 40245870-40249249 Medicago truncatula
Medtr5g092160 1.0kb upstream 1.0kb upstream 1000 false chr5: 40248250-40249249 Medicago truncatula
Medtr5g092160 1.0kb downstream 1.0kb downstream 3380 true chr5: 40244870-40248249 Medicago truncatula
Medtr5g092160 1.0kb downstream 1.0kb downstream 1000 false chr5: 40244870-40245869 Medicago truncatula
Medtr5g092160 2.0kb upstream 2.0kb upstream 4380 true chr5: 40245870-40250249 Medicago truncatula
Medtr5g092160 2.0kb upstream 2.0kb upstream 2000 false chr5: 40248250-40250249 Medicago truncatula
Medtr5g092160 2.0kb downstream 2.0kb downstream 4380 true chr5: 40243870-40248249 Medicago truncatula
Medtr5g092160 2.0kb downstream 2.0kb downstream 2000 false chr5: 40243870-40245869 Medicago truncatula
Medtr5g092160 5.0kb upstream 5.0kb upstream 7380 true chr5: 40245870-40253249 Medicago truncatula
Medtr5g092160 5.0kb upstream 5.0kb upstream 5000 false chr5: 40248250-40253249 Medicago truncatula
Medtr5g092160 5.0kb downstream 5.0kb downstream 7380 true chr5: 40240870-40248249 Medicago truncatula
Medtr5g092160 5.0kb downstream 5.0kb downstream 5000 false chr5: 40240870-40245869 Medicago truncatula
Medtr5g092160 10.0kb upstream 10.0kb upstream 12380 true chr5: 40245870-40258249 Medicago truncatula
Medtr5g092160 10.0kb upstream 10.0kb upstream 10000 false chr5: 40248250-40258249 Medicago truncatula
Medtr5g092160 10.0kb downstream 10.0kb downstream 12380 true chr5: 40235870-40248249 Medicago truncatula
Medtr5g092160 10.0kb downstream 10.0kb downstream 10000 false chr5: 40235870-40245869 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312511 5265 Fabidae View MSA
124062826 5270 Rosid View MSA
123744265 5271 Pentapetalae View MSA
122793169 5272 Eudicot View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.216     High  
cufflinks 12.652     High  
cufflinks 12.214     High  
cufflinks 42.464     High High
cufflinks 10.123       Low
cufflinks 42.13     High High
cufflinks 41.011     High High
cufflinks 10.249     High Low
cufflinks 30.281     High  

0 Strain