Gene : Medtr5g091800 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12300:SF27 - HVA22-LIKE PROTEIN F Description:  TB2/DP1, HVA22 family protein
Genomic Order:  5262 Name:  ? Medtr5g091800
Secondary Identifier:  ? PAC:31089186
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g091800 0.5kb upstream 0.5kb upstream 1860 true chr5: 40061658-40063517 Medicago truncatula
Medtr5g091800 0.5kb upstream 0.5kb upstream 500 false chr5: 40061658-40062157 Medicago truncatula
Medtr5g091800 0.5kb downstream 0.5kb downstream 1860 true chr5: 40062158-40064017 Medicago truncatula
Medtr5g091800 0.5kb downstream 0.5kb downstream 500 false chr5: 40063518-40064017 Medicago truncatula
Medtr5g091800 1.0kb upstream 1.0kb upstream 2360 true chr5: 40061158-40063517 Medicago truncatula
Medtr5g091800 1.0kb upstream 1.0kb upstream 1000 false chr5: 40061158-40062157 Medicago truncatula
Medtr5g091800 1.0kb downstream 1.0kb downstream 2360 true chr5: 40062158-40064517 Medicago truncatula
Medtr5g091800 1.0kb downstream 1.0kb downstream 1000 false chr5: 40063518-40064517 Medicago truncatula
Medtr5g091800 2.0kb upstream 2.0kb upstream 3360 true chr5: 40060158-40063517 Medicago truncatula
Medtr5g091800 2.0kb upstream 2.0kb upstream 2000 false chr5: 40060158-40062157 Medicago truncatula
Medtr5g091800 2.0kb downstream 2.0kb downstream 3360 true chr5: 40062158-40065517 Medicago truncatula
Medtr5g091800 2.0kb downstream 2.0kb downstream 2000 false chr5: 40063518-40065517 Medicago truncatula
Medtr5g091800 5.0kb upstream 5.0kb upstream 6360 true chr5: 40057158-40063517 Medicago truncatula
Medtr5g091800 5.0kb upstream 5.0kb upstream 5000 false chr5: 40057158-40062157 Medicago truncatula
Medtr5g091800 5.0kb downstream 5.0kb downstream 6360 true chr5: 40062158-40068517 Medicago truncatula
Medtr5g091800 5.0kb downstream 5.0kb downstream 5000 false chr5: 40063518-40068517 Medicago truncatula
Medtr5g091800 10.0kb upstream 10.0kb upstream 11360 true chr5: 40052158-40063517 Medicago truncatula
Medtr5g091800 10.0kb upstream 10.0kb upstream 10000 false chr5: 40052158-40062157 Medicago truncatula
Medtr5g091800 10.0kb downstream 10.0kb downstream 11360 true chr5: 40062158-40073517 Medicago truncatula
Medtr5g091800 10.0kb downstream 10.0kb downstream 10000 false chr5: 40063518-40073517 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313435 5265 Fabidae View MSA
124064261 5270 Rosid View MSA
123742916 5271 Pentapetalae View MSA
122793296 5272 Eudicot View MSA
122047958 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.451       Low
cufflinks 2.246        
cufflinks 2.276        
cufflinks 4.333        
cufflinks 2.556        
cufflinks 0.854       Low
cufflinks 5.902       High
cufflinks 2.634        
cufflinks 2.882        

0 Strain