Gene : Medtr5g093570 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Description:  aspartate carbamoyltransferase, catalytic chain
Genomic Order:  5393 Name:  ? Medtr5g093570
Secondary Identifier:  ? PAC:31088980
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-162 Medicago truncatula pathologic  
Mtruncatula PWY-5686 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g093570 0.5kb upstream 0.5kb upstream 4254 true chr5: 40855484-40859737 Medicago truncatula
Medtr5g093570 0.5kb upstream 0.5kb upstream 500 false chr5: 40855484-40855983 Medicago truncatula
Medtr5g093570 0.5kb downstream 0.5kb downstream 4254 true chr5: 40855984-40860237 Medicago truncatula
Medtr5g093570 0.5kb downstream 0.5kb downstream 500 false chr5: 40859738-40860237 Medicago truncatula
Medtr5g093570 1.0kb upstream 1.0kb upstream 4754 true chr5: 40854984-40859737 Medicago truncatula
Medtr5g093570 1.0kb upstream 1.0kb upstream 1000 false chr5: 40854984-40855983 Medicago truncatula
Medtr5g093570 1.0kb downstream 1.0kb downstream 4754 true chr5: 40855984-40860737 Medicago truncatula
Medtr5g093570 1.0kb downstream 1.0kb downstream 1000 false chr5: 40859738-40860737 Medicago truncatula
Medtr5g093570 2.0kb upstream 2.0kb upstream 5754 true chr5: 40853984-40859737 Medicago truncatula
Medtr5g093570 2.0kb upstream 2.0kb upstream 2000 false chr5: 40853984-40855983 Medicago truncatula
Medtr5g093570 2.0kb downstream 2.0kb downstream 5754 true chr5: 40855984-40861737 Medicago truncatula
Medtr5g093570 2.0kb downstream 2.0kb downstream 2000 false chr5: 40859738-40861737 Medicago truncatula
Medtr5g093570 5.0kb upstream 5.0kb upstream 8754 true chr5: 40850984-40859737 Medicago truncatula
Medtr5g093570 5.0kb upstream 5.0kb upstream 5000 false chr5: 40850984-40855983 Medicago truncatula
Medtr5g093570 5.0kb downstream 5.0kb downstream 8754 true chr5: 40855984-40864737 Medicago truncatula
Medtr5g093570 5.0kb downstream 5.0kb downstream 5000 false chr5: 40859738-40864737 Medicago truncatula
Medtr5g093570 10.0kb upstream 10.0kb upstream 13754 true chr5: 40845984-40859737 Medicago truncatula
Medtr5g093570 10.0kb upstream 10.0kb upstream 10000 false chr5: 40845984-40855983 Medicago truncatula
Medtr5g093570 10.0kb downstream 10.0kb downstream 13754 true chr5: 40855984-40869737 Medicago truncatula
Medtr5g093570 10.0kb downstream 10.0kb downstream 10000 false chr5: 40859738-40869737 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312207 5265 Fabidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.973        
cufflinks 0.668       Low
cufflinks 1.131        
cufflinks 0.972        
cufflinks 1.249        
cufflinks 0.628       Low
cufflinks 1.476       High
cufflinks 0.656       Low
cufflinks 1.227        

0 Strain