Gene : Medtr5g093560 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13161:SF15 - SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG Description:  SWAP (suppressor-of-white-APricot)/surp domain protein, putative
Genomic Order:  5392 Name:  ? Medtr5g093560
Secondary Identifier:  ? PAC:31088428
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g093560 0.5kb upstream 0.5kb upstream 7073 true chr5: 40847520-40854592 Medicago truncatula
Medtr5g093560 0.5kb upstream 0.5kb upstream 500 false chr5: 40847520-40848019 Medicago truncatula
Medtr5g093560 0.5kb downstream 0.5kb downstream 7073 true chr5: 40848020-40855092 Medicago truncatula
Medtr5g093560 0.5kb downstream 0.5kb downstream 500 false chr5: 40854593-40855092 Medicago truncatula
Medtr5g093560 1.0kb upstream 1.0kb upstream 7573 true chr5: 40847020-40854592 Medicago truncatula
Medtr5g093560 1.0kb upstream 1.0kb upstream 1000 false chr5: 40847020-40848019 Medicago truncatula
Medtr5g093560 1.0kb downstream 1.0kb downstream 7573 true chr5: 40848020-40855592 Medicago truncatula
Medtr5g093560 1.0kb downstream 1.0kb downstream 1000 false chr5: 40854593-40855592 Medicago truncatula
Medtr5g093560 2.0kb upstream 2.0kb upstream 8573 true chr5: 40846020-40854592 Medicago truncatula
Medtr5g093560 2.0kb upstream 2.0kb upstream 2000 false chr5: 40846020-40848019 Medicago truncatula
Medtr5g093560 2.0kb downstream 2.0kb downstream 8573 true chr5: 40848020-40856592 Medicago truncatula
Medtr5g093560 2.0kb downstream 2.0kb downstream 2000 false chr5: 40854593-40856592 Medicago truncatula
Medtr5g093560 5.0kb upstream 5.0kb upstream 11573 true chr5: 40843020-40854592 Medicago truncatula
Medtr5g093560 5.0kb upstream 5.0kb upstream 5000 false chr5: 40843020-40848019 Medicago truncatula
Medtr5g093560 5.0kb downstream 5.0kb downstream 11573 true chr5: 40848020-40859592 Medicago truncatula
Medtr5g093560 5.0kb downstream 5.0kb downstream 5000 false chr5: 40854593-40859592 Medicago truncatula
Medtr5g093560 10.0kb upstream 10.0kb upstream 16573 true chr5: 40838020-40854592 Medicago truncatula
Medtr5g093560 10.0kb upstream 10.0kb upstream 10000 false chr5: 40838020-40848019 Medicago truncatula
Medtr5g093560 10.0kb downstream 10.0kb downstream 16573 true chr5: 40848020-40864592 Medicago truncatula
Medtr5g093560 10.0kb downstream 10.0kb downstream 10000 false chr5: 40854593-40864592 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301281 5265 Fabidae View MSA
124061656 5270 Rosid View MSA
123739553 5271 Pentapetalae View MSA
122786719 5272 Eudicot View MSA
122047269 5273 Angiosperm View MSA
121346559 5274 Embryophyte View MSA
123424366 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.432       High
cufflinks 0.278        
cufflinks 0.326        
cufflinks 0.047     Low Low
cufflinks 0.319        
cufflinks 0.071     Low Low
cufflinks 0.133        
cufflinks 0.26        
cufflinks 0.073     Low Low

0 Strain