Gene : Medtr5g093600 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR19957:SF117 - SYNTAXIN-31 Description:  syntaxin of plants protein
Genomic Order:  5396 Name:  ? Medtr5g093600
Secondary Identifier:  ? PAC:31085434
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g093600 0.5kb upstream 0.5kb upstream 6906 true chr5: 40872415-40879320 Medicago truncatula
Medtr5g093600 0.5kb upstream 0.5kb upstream 500 false chr5: 40878821-40879320 Medicago truncatula
Medtr5g093600 0.5kb downstream 0.5kb downstream 6906 true chr5: 40871915-40878820 Medicago truncatula
Medtr5g093600 0.5kb downstream 0.5kb downstream 500 false chr5: 40871915-40872414 Medicago truncatula
Medtr5g093600 1.0kb upstream 1.0kb upstream 7406 true chr5: 40872415-40879820 Medicago truncatula
Medtr5g093600 1.0kb upstream 1.0kb upstream 1000 false chr5: 40878821-40879820 Medicago truncatula
Medtr5g093600 1.0kb downstream 1.0kb downstream 7406 true chr5: 40871415-40878820 Medicago truncatula
Medtr5g093600 1.0kb downstream 1.0kb downstream 1000 false chr5: 40871415-40872414 Medicago truncatula
Medtr5g093600 2.0kb upstream 2.0kb upstream 8406 true chr5: 40872415-40880820 Medicago truncatula
Medtr5g093600 2.0kb upstream 2.0kb upstream 2000 false chr5: 40878821-40880820 Medicago truncatula
Medtr5g093600 2.0kb downstream 2.0kb downstream 8406 true chr5: 40870415-40878820 Medicago truncatula
Medtr5g093600 2.0kb downstream 2.0kb downstream 2000 false chr5: 40870415-40872414 Medicago truncatula
Medtr5g093600 5.0kb upstream 5.0kb upstream 11406 true chr5: 40872415-40883820 Medicago truncatula
Medtr5g093600 5.0kb upstream 5.0kb upstream 5000 false chr5: 40878821-40883820 Medicago truncatula
Medtr5g093600 5.0kb downstream 5.0kb downstream 11406 true chr5: 40867415-40878820 Medicago truncatula
Medtr5g093600 5.0kb downstream 5.0kb downstream 5000 false chr5: 40867415-40872414 Medicago truncatula
Medtr5g093600 10.0kb upstream 10.0kb upstream 16406 true chr5: 40872415-40888820 Medicago truncatula
Medtr5g093600 10.0kb upstream 10.0kb upstream 10000 false chr5: 40878821-40888820 Medicago truncatula
Medtr5g093600 10.0kb downstream 10.0kb downstream 16406 true chr5: 40862415-40878820 Medicago truncatula
Medtr5g093600 10.0kb downstream 10.0kb downstream 10000 false chr5: 40862415-40872414 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299505 5265 Fabidae View MSA
124069079 5270 Rosid View MSA
123747067 5271 Pentapetalae View MSA
122787629 5272 Eudicot View MSA
122042562 5273 Angiosperm View MSA
121309986 5274 Embryophyte View MSA
123347598 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.777        
cufflinks 1.478        
cufflinks 1.831        
cufflinks 1.168        
cufflinks 1.452        
cufflinks 0.55       Low
cufflinks 1.37        
cufflinks 1.463        
cufflinks 1.174        

0 Strain