Gene : Medtr5g092790 M. truncatula Mt4.0v1
Defline:  (1 of 168) PTHR14155 - RING FINGER DOMAIN-CONTAINING Description:  anaphase-promoting complex subunit 11 RING-H2 finger protein
Genomic Order:  5336 Name:  ? Medtr5g092790
Secondary Identifier:  ? PAC:31089278
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g092790 0.5kb upstream 0.5kb upstream 1980 true chr5: 40519317-40521296 Medicago truncatula
Medtr5g092790 0.5kb upstream 0.5kb upstream 500 false chr5: 40520797-40521296 Medicago truncatula
Medtr5g092790 0.5kb downstream 0.5kb downstream 1980 true chr5: 40518817-40520796 Medicago truncatula
Medtr5g092790 0.5kb downstream 0.5kb downstream 500 false chr5: 40518817-40519316 Medicago truncatula
Medtr5g092790 1.0kb upstream 1.0kb upstream 2480 true chr5: 40519317-40521796 Medicago truncatula
Medtr5g092790 1.0kb upstream 1.0kb upstream 1000 false chr5: 40520797-40521796 Medicago truncatula
Medtr5g092790 1.0kb downstream 1.0kb downstream 2480 true chr5: 40518317-40520796 Medicago truncatula
Medtr5g092790 1.0kb downstream 1.0kb downstream 1000 false chr5: 40518317-40519316 Medicago truncatula
Medtr5g092790 2.0kb upstream 2.0kb upstream 3480 true chr5: 40519317-40522796 Medicago truncatula
Medtr5g092790 2.0kb upstream 2.0kb upstream 2000 false chr5: 40520797-40522796 Medicago truncatula
Medtr5g092790 2.0kb downstream 2.0kb downstream 3480 true chr5: 40517317-40520796 Medicago truncatula
Medtr5g092790 2.0kb downstream 2.0kb downstream 2000 false chr5: 40517317-40519316 Medicago truncatula
Medtr5g092790 5.0kb upstream 5.0kb upstream 6480 true chr5: 40519317-40525796 Medicago truncatula
Medtr5g092790 5.0kb upstream 5.0kb upstream 5000 false chr5: 40520797-40525796 Medicago truncatula
Medtr5g092790 5.0kb downstream 5.0kb downstream 6480 true chr5: 40514317-40520796 Medicago truncatula
Medtr5g092790 5.0kb downstream 5.0kb downstream 5000 false chr5: 40514317-40519316 Medicago truncatula
Medtr5g092790 10.0kb upstream 10.0kb upstream 11480 true chr5: 40519317-40530796 Medicago truncatula
Medtr5g092790 10.0kb upstream 10.0kb upstream 10000 false chr5: 40520797-40530796 Medicago truncatula
Medtr5g092790 10.0kb downstream 10.0kb downstream 11480 true chr5: 40509317-40520796 Medicago truncatula
Medtr5g092790 10.0kb downstream 10.0kb downstream 10000 false chr5: 40509317-40519316 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791916 5273 Angiosperm View MSA
122311748 5265 Fabidae View MSA
124064654 5270 Rosid View MSA
123747465 5271 Pentapetalae View MSA
122795286 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121063185 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.078        
cufflinks 0.01     Low Low
cufflinks 0.03     Low  
cufflinks 0.941       High
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.067       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.364        

0 Strain