Gene : Medtr5g092060 M. truncatula Mt4.0v1

Defline:  (1 of 2) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Description:  Ras-related small GTP-binding family protein
Genomic Order:  5281 Name:  ? Medtr5g092060
Secondary Identifier:  ? PAC:31087692

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g092060 0.5kb upstream 0.5kb upstream 3803 true chr5: 40189315-40193117 Medicago truncatula
Medtr5g092060 0.5kb upstream 0.5kb upstream 500 false chr5: 40192618-40193117 Medicago truncatula
Medtr5g092060 0.5kb downstream 0.5kb downstream 3803 true chr5: 40188815-40192617 Medicago truncatula
Medtr5g092060 0.5kb downstream 0.5kb downstream 500 false chr5: 40188815-40189314 Medicago truncatula
Medtr5g092060 1.0kb upstream 1.0kb upstream 4303 true chr5: 40189315-40193617 Medicago truncatula
Medtr5g092060 1.0kb upstream 1.0kb upstream 1000 false chr5: 40192618-40193617 Medicago truncatula
Medtr5g092060 1.0kb downstream 1.0kb downstream 4303 true chr5: 40188315-40192617 Medicago truncatula
Medtr5g092060 1.0kb downstream 1.0kb downstream 1000 false chr5: 40188315-40189314 Medicago truncatula
Medtr5g092060 2.0kb upstream 2.0kb upstream 5303 true chr5: 40189315-40194617 Medicago truncatula
Medtr5g092060 2.0kb upstream 2.0kb upstream 2000 false chr5: 40192618-40194617 Medicago truncatula
Medtr5g092060 2.0kb downstream 2.0kb downstream 5303 true chr5: 40187315-40192617 Medicago truncatula
Medtr5g092060 2.0kb downstream 2.0kb downstream 2000 false chr5: 40187315-40189314 Medicago truncatula
Medtr5g092060 5.0kb upstream 5.0kb upstream 8303 true chr5: 40189315-40197617 Medicago truncatula
Medtr5g092060 5.0kb upstream 5.0kb upstream 5000 false chr5: 40192618-40197617 Medicago truncatula
Medtr5g092060 5.0kb downstream 5.0kb downstream 8303 true chr5: 40184315-40192617 Medicago truncatula
Medtr5g092060 5.0kb downstream 5.0kb downstream 5000 false chr5: 40184315-40189314 Medicago truncatula
Medtr5g092060 10.0kb upstream 10.0kb upstream 13303 true chr5: 40189315-40202617 Medicago truncatula
Medtr5g092060 10.0kb upstream 10.0kb upstream 10000 false chr5: 40192618-40202617 Medicago truncatula
Medtr5g092060 10.0kb downstream 10.0kb downstream 13303 true chr5: 40179315-40192617 Medicago truncatula
Medtr5g092060 10.0kb downstream 10.0kb downstream 10000 false chr5: 40179315-40189314 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
122304451 5265 Fabidae View MSA
124064316 5270 Rosid View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.591     High High
cufflinks 3.096        
cufflinks 3.187        
cufflinks 3.283        
cufflinks 2.318       Low
cufflinks 4.124        
cufflinks 7.766       High
cufflinks 3.017        
cufflinks 3.368        

0 Strain