Gene : Medtr5g082620 M. truncatula Mt4.0v1
Defline:  (1 of 16) 3.1.4.11 - Phosphoinositide phospholipase C / Triphosphoinositide phosphodiesterase Description:  phosphatidylinositol-specific phospholipase C
Genomic Order:  4592 Name:  ? Medtr5g082620
Secondary Identifier:  ? PAC:31089053
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPASYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-6351 Medicago truncatula pathologic  
Mtruncatula PWY-6367 Medicago truncatula pathologic  
Mtruncatula PWY-7039 Medicago truncatula pathologic  

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g082620 0.5kb upstream 0.5kb upstream 6063 true chr5: 35547772-35553834 Medicago truncatula
Medtr5g082620 0.5kb upstream 0.5kb upstream 500 false chr5: 35547772-35548271 Medicago truncatula
Medtr5g082620 0.5kb downstream 0.5kb downstream 6063 true chr5: 35548272-35554334 Medicago truncatula
Medtr5g082620 0.5kb downstream 0.5kb downstream 500 false chr5: 35553835-35554334 Medicago truncatula
Medtr5g082620 1.0kb upstream 1.0kb upstream 6563 true chr5: 35547272-35553834 Medicago truncatula
Medtr5g082620 1.0kb upstream 1.0kb upstream 1000 false chr5: 35547272-35548271 Medicago truncatula
Medtr5g082620 1.0kb downstream 1.0kb downstream 6563 true chr5: 35548272-35554834 Medicago truncatula
Medtr5g082620 1.0kb downstream 1.0kb downstream 1000 false chr5: 35553835-35554834 Medicago truncatula
Medtr5g082620 2.0kb upstream 2.0kb upstream 7563 true chr5: 35546272-35553834 Medicago truncatula
Medtr5g082620 2.0kb upstream 2.0kb upstream 2000 false chr5: 35546272-35548271 Medicago truncatula
Medtr5g082620 2.0kb downstream 2.0kb downstream 7563 true chr5: 35548272-35555834 Medicago truncatula
Medtr5g082620 2.0kb downstream 2.0kb downstream 2000 false chr5: 35553835-35555834 Medicago truncatula
Medtr5g082620 5.0kb upstream 5.0kb upstream 10563 true chr5: 35543272-35553834 Medicago truncatula
Medtr5g082620 5.0kb upstream 5.0kb upstream 5000 false chr5: 35543272-35548271 Medicago truncatula
Medtr5g082620 5.0kb downstream 5.0kb downstream 10563 true chr5: 35548272-35558834 Medicago truncatula
Medtr5g082620 5.0kb downstream 5.0kb downstream 5000 false chr5: 35553835-35558834 Medicago truncatula
Medtr5g082620 10.0kb upstream 10.0kb upstream 15563 true chr5: 35538272-35553834 Medicago truncatula
Medtr5g082620 10.0kb upstream 10.0kb upstream 10000 false chr5: 35538272-35548271 Medicago truncatula
Medtr5g082620 10.0kb downstream 10.0kb downstream 15563 true chr5: 35548272-35563834 Medicago truncatula
Medtr5g082620 10.0kb downstream 10.0kb downstream 10000 false chr5: 35553835-35563834 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311245 5265 Fabidae View MSA
124061623 5270 Rosid View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.462       Low
cufflinks 11.985     High High
cufflinks 6.206        
cufflinks 3.533        
cufflinks 10.355     High High
cufflinks 1.814       Low
cufflinks 5.072        
cufflinks 8.672        
cufflinks 5.081        

0 Strain