Gene : Medtr5g082590 M. truncatula Mt4.0v1
Defline:  (1 of 16) 3.1.4.11 - Phosphoinositide phospholipase C / Triphosphoinositide phosphodiesterase Description:  phosphoinositide-specific phospholipase C family protein
Genomic Order:  4590 Name:  ? Medtr5g082590
Secondary Identifier:  ? PAC:31091684
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPASYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-6351 Medicago truncatula pathologic  
Mtruncatula PWY-6367 Medicago truncatula pathologic  
Mtruncatula PWY-7039 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g082590 0.5kb upstream 0.5kb upstream 4677 true chr5: 35518964-35523640 Medicago truncatula
Medtr5g082590 0.5kb upstream 0.5kb upstream 500 false chr5: 35518964-35519463 Medicago truncatula
Medtr5g082590 0.5kb downstream 0.5kb downstream 4677 true chr5: 35519464-35524140 Medicago truncatula
Medtr5g082590 0.5kb downstream 0.5kb downstream 500 false chr5: 35523641-35524140 Medicago truncatula
Medtr5g082590 1.0kb upstream 1.0kb upstream 5177 true chr5: 35518464-35523640 Medicago truncatula
Medtr5g082590 1.0kb upstream 1.0kb upstream 1000 false chr5: 35518464-35519463 Medicago truncatula
Medtr5g082590 1.0kb downstream 1.0kb downstream 5177 true chr5: 35519464-35524640 Medicago truncatula
Medtr5g082590 1.0kb downstream 1.0kb downstream 1000 false chr5: 35523641-35524640 Medicago truncatula
Medtr5g082590 2.0kb upstream 2.0kb upstream 6177 true chr5: 35517464-35523640 Medicago truncatula
Medtr5g082590 2.0kb upstream 2.0kb upstream 2000 false chr5: 35517464-35519463 Medicago truncatula
Medtr5g082590 2.0kb downstream 2.0kb downstream 6177 true chr5: 35519464-35525640 Medicago truncatula
Medtr5g082590 2.0kb downstream 2.0kb downstream 2000 false chr5: 35523641-35525640 Medicago truncatula
Medtr5g082590 5.0kb upstream 5.0kb upstream 9177 true chr5: 35514464-35523640 Medicago truncatula
Medtr5g082590 5.0kb upstream 5.0kb upstream 5000 false chr5: 35514464-35519463 Medicago truncatula
Medtr5g082590 5.0kb downstream 5.0kb downstream 9177 true chr5: 35519464-35528640 Medicago truncatula
Medtr5g082590 5.0kb downstream 5.0kb downstream 5000 false chr5: 35523641-35528640 Medicago truncatula
Medtr5g082590 10.0kb upstream 10.0kb upstream 14177 true chr5: 35509464-35523640 Medicago truncatula
Medtr5g082590 10.0kb upstream 10.0kb upstream 10000 false chr5: 35509464-35519463 Medicago truncatula
Medtr5g082590 10.0kb downstream 10.0kb downstream 14177 true chr5: 35519464-35533640 Medicago truncatula
Medtr5g082590 10.0kb downstream 10.0kb downstream 10000 false chr5: 35523641-35533640 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308312 5265 Fabidae View MSA
124071120 5270 Rosid View MSA
123747360 5271 Pentapetalae View MSA
122796639 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low High
cufflinks 0.004     Low Low
cufflinks 0.005     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low High
cufflinks 0.005     Low  
cufflinks 0.007     Low  

0 Strain