Gene : Medtr5g083230 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31301:SF4 - LOB DOMAIN-CONTAINING PROTEIN 12 Description:  lateral organ boundaries (LOB) domain protein
Genomic Order:  4633 Name:  ? Medtr5g083230
Secondary Identifier:  ? PAC:31090076
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g083230 0.5kb upstream 0.5kb upstream 2016 true chr5: 35918141-35920156 Medicago truncatula
Medtr5g083230 0.5kb upstream 0.5kb upstream 500 false chr5: 35918141-35918640 Medicago truncatula
Medtr5g083230 0.5kb downstream 0.5kb downstream 2016 true chr5: 35918641-35920656 Medicago truncatula
Medtr5g083230 0.5kb downstream 0.5kb downstream 500 false chr5: 35920157-35920656 Medicago truncatula
Medtr5g083230 1.0kb upstream 1.0kb upstream 2516 true chr5: 35917641-35920156 Medicago truncatula
Medtr5g083230 1.0kb upstream 1.0kb upstream 1000 false chr5: 35917641-35918640 Medicago truncatula
Medtr5g083230 1.0kb downstream 1.0kb downstream 2516 true chr5: 35918641-35921156 Medicago truncatula
Medtr5g083230 1.0kb downstream 1.0kb downstream 1000 false chr5: 35920157-35921156 Medicago truncatula
Medtr5g083230 2.0kb upstream 2.0kb upstream 3516 true chr5: 35916641-35920156 Medicago truncatula
Medtr5g083230 2.0kb upstream 2.0kb upstream 2000 false chr5: 35916641-35918640 Medicago truncatula
Medtr5g083230 2.0kb downstream 2.0kb downstream 3516 true chr5: 35918641-35922156 Medicago truncatula
Medtr5g083230 2.0kb downstream 2.0kb downstream 2000 false chr5: 35920157-35922156 Medicago truncatula
Medtr5g083230 5.0kb upstream 5.0kb upstream 6516 true chr5: 35913641-35920156 Medicago truncatula
Medtr5g083230 5.0kb upstream 5.0kb upstream 5000 false chr5: 35913641-35918640 Medicago truncatula
Medtr5g083230 5.0kb downstream 5.0kb downstream 6516 true chr5: 35918641-35925156 Medicago truncatula
Medtr5g083230 5.0kb downstream 5.0kb downstream 5000 false chr5: 35920157-35925156 Medicago truncatula
Medtr5g083230 10.0kb upstream 10.0kb upstream 11516 true chr5: 35908641-35920156 Medicago truncatula
Medtr5g083230 10.0kb upstream 10.0kb upstream 10000 false chr5: 35908641-35918640 Medicago truncatula
Medtr5g083230 10.0kb downstream 10.0kb downstream 11516 true chr5: 35918641-35930156 Medicago truncatula
Medtr5g083230 10.0kb downstream 10.0kb downstream 10000 false chr5: 35920157-35930156 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307046 5265 Fabidae View MSA
124071000 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.079        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.18        

0 Strain