Gene : Medtr5g083120 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12585:SF26 - SISTER CHROMATID COHESION 1 PROTEIN 1 Description:  sister chromatid cohesion 1 protein, putative
Genomic Order:  4626 Name:  ? Medtr5g083120
Secondary Identifier:  ? PAC:31087747
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g083120 0.5kb upstream 0.5kb upstream 5342 true chr5: 35862679-35868020 Medicago truncatula
Medtr5g083120 0.5kb upstream 0.5kb upstream 500 false chr5: 35867521-35868020 Medicago truncatula
Medtr5g083120 0.5kb downstream 0.5kb downstream 5342 true chr5: 35862179-35867520 Medicago truncatula
Medtr5g083120 0.5kb downstream 0.5kb downstream 500 false chr5: 35862179-35862678 Medicago truncatula
Medtr5g083120 1.0kb upstream 1.0kb upstream 5842 true chr5: 35862679-35868520 Medicago truncatula
Medtr5g083120 1.0kb upstream 1.0kb upstream 1000 false chr5: 35867521-35868520 Medicago truncatula
Medtr5g083120 1.0kb downstream 1.0kb downstream 5842 true chr5: 35861679-35867520 Medicago truncatula
Medtr5g083120 1.0kb downstream 1.0kb downstream 1000 false chr5: 35861679-35862678 Medicago truncatula
Medtr5g083120 2.0kb upstream 2.0kb upstream 6842 true chr5: 35862679-35869520 Medicago truncatula
Medtr5g083120 2.0kb upstream 2.0kb upstream 2000 false chr5: 35867521-35869520 Medicago truncatula
Medtr5g083120 2.0kb downstream 2.0kb downstream 6842 true chr5: 35860679-35867520 Medicago truncatula
Medtr5g083120 2.0kb downstream 2.0kb downstream 2000 false chr5: 35860679-35862678 Medicago truncatula
Medtr5g083120 5.0kb upstream 5.0kb upstream 9842 true chr5: 35862679-35872520 Medicago truncatula
Medtr5g083120 5.0kb upstream 5.0kb upstream 5000 false chr5: 35867521-35872520 Medicago truncatula
Medtr5g083120 5.0kb downstream 5.0kb downstream 9842 true chr5: 35857679-35867520 Medicago truncatula
Medtr5g083120 5.0kb downstream 5.0kb downstream 5000 false chr5: 35857679-35862678 Medicago truncatula
Medtr5g083120 10.0kb upstream 10.0kb upstream 14842 true chr5: 35862679-35877520 Medicago truncatula
Medtr5g083120 10.0kb upstream 10.0kb upstream 10000 false chr5: 35867521-35877520 Medicago truncatula
Medtr5g083120 10.0kb downstream 10.0kb downstream 14842 true chr5: 35852679-35867520 Medicago truncatula
Medtr5g083120 10.0kb downstream 10.0kb downstream 10000 false chr5: 35852679-35862678 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312296 5265 Fabidae View MSA
124060947 5270 Rosid View MSA
123744806 5271 Pentapetalae View MSA
122792997 5272 Eudicot View MSA
122042862 5273 Angiosperm View MSA
121347788 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low High
cufflinks 0.008     Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  

0 Strain