Gene : Medtr5g083740 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31045:SF4 - (Z)-GAMMA-BISABOLENE SYNTHASE 1-RELATED Description:  PLAC8 family protein
Genomic Order:  4675 Name:  ? Medtr5g083740
Secondary Identifier:  ? PAC:31091125
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g083740 0.5kb upstream 0.5kb upstream 3871 true chr5: 36120768-36124638 Medicago truncatula
Medtr5g083740 0.5kb upstream 0.5kb upstream 500 false chr5: 36124139-36124638 Medicago truncatula
Medtr5g083740 0.5kb downstream 0.5kb downstream 3871 true chr5: 36120268-36124138 Medicago truncatula
Medtr5g083740 0.5kb downstream 0.5kb downstream 500 false chr5: 36120268-36120767 Medicago truncatula
Medtr5g083740 1.0kb upstream 1.0kb upstream 4371 true chr5: 36120768-36125138 Medicago truncatula
Medtr5g083740 1.0kb upstream 1.0kb upstream 1000 false chr5: 36124139-36125138 Medicago truncatula
Medtr5g083740 1.0kb downstream 1.0kb downstream 4371 true chr5: 36119768-36124138 Medicago truncatula
Medtr5g083740 1.0kb downstream 1.0kb downstream 1000 false chr5: 36119768-36120767 Medicago truncatula
Medtr5g083740 2.0kb upstream 2.0kb upstream 5371 true chr5: 36120768-36126138 Medicago truncatula
Medtr5g083740 2.0kb upstream 2.0kb upstream 2000 false chr5: 36124139-36126138 Medicago truncatula
Medtr5g083740 2.0kb downstream 2.0kb downstream 5371 true chr5: 36118768-36124138 Medicago truncatula
Medtr5g083740 2.0kb downstream 2.0kb downstream 2000 false chr5: 36118768-36120767 Medicago truncatula
Medtr5g083740 5.0kb upstream 5.0kb upstream 8371 true chr5: 36120768-36129138 Medicago truncatula
Medtr5g083740 5.0kb upstream 5.0kb upstream 5000 false chr5: 36124139-36129138 Medicago truncatula
Medtr5g083740 5.0kb downstream 5.0kb downstream 8371 true chr5: 36115768-36124138 Medicago truncatula
Medtr5g083740 5.0kb downstream 5.0kb downstream 5000 false chr5: 36115768-36120767 Medicago truncatula
Medtr5g083740 10.0kb upstream 10.0kb upstream 13371 true chr5: 36120768-36134138 Medicago truncatula
Medtr5g083740 10.0kb upstream 10.0kb upstream 10000 false chr5: 36124139-36134138 Medicago truncatula
Medtr5g083740 10.0kb downstream 10.0kb downstream 13371 true chr5: 36110768-36124138 Medicago truncatula
Medtr5g083740 10.0kb downstream 10.0kb downstream 10000 false chr5: 36110768-36120767 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300025 5265 Fabidae View MSA
124061942 5270 Rosid View MSA
123744852 5271 Pentapetalae View MSA
122790012 5272 Eudicot View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.918     High High
cufflinks 6.464        
cufflinks 7.471        
cufflinks 8.807        
cufflinks 6.999        
cufflinks 2.95       Low
cufflinks 8.379        
cufflinks 6.348        
cufflinks 8.822        

0 Strain