Gene : Medtr5g083720 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Description:  Ca(2+)-dependent nuclease-like protein
Genomic Order:  4673 Name:  ? Medtr5g083720
Secondary Identifier:  ? PAC:31089398
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g083720 0.5kb upstream 0.5kb upstream 4093 true chr5: 36111902-36115994 Medicago truncatula
Medtr5g083720 0.5kb upstream 0.5kb upstream 500 false chr5: 36111902-36112401 Medicago truncatula
Medtr5g083720 0.5kb downstream 0.5kb downstream 4093 true chr5: 36112402-36116494 Medicago truncatula
Medtr5g083720 0.5kb downstream 0.5kb downstream 500 false chr5: 36115995-36116494 Medicago truncatula
Medtr5g083720 1.0kb upstream 1.0kb upstream 4593 true chr5: 36111402-36115994 Medicago truncatula
Medtr5g083720 1.0kb upstream 1.0kb upstream 1000 false chr5: 36111402-36112401 Medicago truncatula
Medtr5g083720 1.0kb downstream 1.0kb downstream 4593 true chr5: 36112402-36116994 Medicago truncatula
Medtr5g083720 1.0kb downstream 1.0kb downstream 1000 false chr5: 36115995-36116994 Medicago truncatula
Medtr5g083720 2.0kb upstream 2.0kb upstream 5593 true chr5: 36110402-36115994 Medicago truncatula
Medtr5g083720 2.0kb upstream 2.0kb upstream 2000 false chr5: 36110402-36112401 Medicago truncatula
Medtr5g083720 2.0kb downstream 2.0kb downstream 5593 true chr5: 36112402-36117994 Medicago truncatula
Medtr5g083720 2.0kb downstream 2.0kb downstream 2000 false chr5: 36115995-36117994 Medicago truncatula
Medtr5g083720 5.0kb upstream 5.0kb upstream 8593 true chr5: 36107402-36115994 Medicago truncatula
Medtr5g083720 5.0kb upstream 5.0kb upstream 5000 false chr5: 36107402-36112401 Medicago truncatula
Medtr5g083720 5.0kb downstream 5.0kb downstream 8593 true chr5: 36112402-36120994 Medicago truncatula
Medtr5g083720 5.0kb downstream 5.0kb downstream 5000 false chr5: 36115995-36120994 Medicago truncatula
Medtr5g083720 10.0kb upstream 10.0kb upstream 13593 true chr5: 36102402-36115994 Medicago truncatula
Medtr5g083720 10.0kb upstream 10.0kb upstream 10000 false chr5: 36102402-36112401 Medicago truncatula
Medtr5g083720 10.0kb downstream 10.0kb downstream 13593 true chr5: 36112402-36125994 Medicago truncatula
Medtr5g083720 10.0kb downstream 10.0kb downstream 10000 false chr5: 36115995-36125994 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310857 5265 Fabidae View MSA
124062964 5270 Rosid View MSA
123736698 5271 Pentapetalae View MSA
122792401 5272 Eudicot View MSA
122046760 5273 Angiosperm View MSA
121347603 5274 Embryophyte View MSA
123428455 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.964     High  
cufflinks 11.987     High  
cufflinks 17.753     High  
cufflinks 14.642     High  
cufflinks 12.367     High  
cufflinks 10.862     High  
cufflinks 28.684     High High
cufflinks 14.091     High  
cufflinks 8.949       Low

0 Strain