Gene : Medtr5g083780 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR14211 - GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2 Description:  Nop53 (60S ribosomal biogenesis) protein
Genomic Order:  4679 Name:  ? Medtr5g083780
Secondary Identifier:  ? PAC:31091335
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g083780 0.5kb upstream 0.5kb upstream 4834 true chr5: 36142069-36146902 Medicago truncatula
Medtr5g083780 0.5kb upstream 0.5kb upstream 500 false chr5: 36146403-36146902 Medicago truncatula
Medtr5g083780 0.5kb downstream 0.5kb downstream 4834 true chr5: 36141569-36146402 Medicago truncatula
Medtr5g083780 0.5kb downstream 0.5kb downstream 500 false chr5: 36141569-36142068 Medicago truncatula
Medtr5g083780 1.0kb upstream 1.0kb upstream 5334 true chr5: 36142069-36147402 Medicago truncatula
Medtr5g083780 1.0kb upstream 1.0kb upstream 1000 false chr5: 36146403-36147402 Medicago truncatula
Medtr5g083780 1.0kb downstream 1.0kb downstream 5334 true chr5: 36141069-36146402 Medicago truncatula
Medtr5g083780 1.0kb downstream 1.0kb downstream 1000 false chr5: 36141069-36142068 Medicago truncatula
Medtr5g083780 2.0kb upstream 2.0kb upstream 6334 true chr5: 36142069-36148402 Medicago truncatula
Medtr5g083780 2.0kb upstream 2.0kb upstream 2000 false chr5: 36146403-36148402 Medicago truncatula
Medtr5g083780 2.0kb downstream 2.0kb downstream 6334 true chr5: 36140069-36146402 Medicago truncatula
Medtr5g083780 2.0kb downstream 2.0kb downstream 2000 false chr5: 36140069-36142068 Medicago truncatula
Medtr5g083780 5.0kb upstream 5.0kb upstream 9334 true chr5: 36142069-36151402 Medicago truncatula
Medtr5g083780 5.0kb upstream 5.0kb upstream 5000 false chr5: 36146403-36151402 Medicago truncatula
Medtr5g083780 5.0kb downstream 5.0kb downstream 9334 true chr5: 36137069-36146402 Medicago truncatula
Medtr5g083780 5.0kb downstream 5.0kb downstream 5000 false chr5: 36137069-36142068 Medicago truncatula
Medtr5g083780 10.0kb upstream 10.0kb upstream 14334 true chr5: 36142069-36156402 Medicago truncatula
Medtr5g083780 10.0kb upstream 10.0kb upstream 10000 false chr5: 36146403-36156402 Medicago truncatula
Medtr5g083780 10.0kb downstream 10.0kb downstream 14334 true chr5: 36132069-36146402 Medicago truncatula
Medtr5g083780 10.0kb downstream 10.0kb downstream 10000 false chr5: 36132069-36142068 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306821 5265 Fabidae View MSA
124069341 5270 Rosid View MSA
123739038 5271 Pentapetalae View MSA
122792577 5272 Eudicot View MSA
122046811 5273 Angiosperm View MSA
121347392 5274 Embryophyte View MSA
123425995 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.958        
cufflinks 6.767        
cufflinks 6.143        
cufflinks 3.159       Low
cufflinks 9.569       High
cufflinks 2.64       Low
cufflinks 4.981        
cufflinks 6.035        
cufflinks 3.842        

0 Strain