Gene : Medtr5g083340 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED Description:  dehydration-responsive element-binding protein
Genomic Order:  4642 Name:  ? Medtr5g083340
Secondary Identifier:  ? PAC:31085863
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g083340 0.5kb upstream 0.5kb upstream 2851 true chr5: 35977177-35980027 Medicago truncatula
Medtr5g083340 0.5kb upstream 0.5kb upstream 500 false chr5: 35979528-35980027 Medicago truncatula
Medtr5g083340 0.5kb downstream 0.5kb downstream 2851 true chr5: 35976677-35979527 Medicago truncatula
Medtr5g083340 0.5kb downstream 0.5kb downstream 500 false chr5: 35976677-35977176 Medicago truncatula
Medtr5g083340 1.0kb upstream 1.0kb upstream 3351 true chr5: 35977177-35980527 Medicago truncatula
Medtr5g083340 1.0kb upstream 1.0kb upstream 1000 false chr5: 35979528-35980527 Medicago truncatula
Medtr5g083340 1.0kb downstream 1.0kb downstream 3351 true chr5: 35976177-35979527 Medicago truncatula
Medtr5g083340 1.0kb downstream 1.0kb downstream 1000 false chr5: 35976177-35977176 Medicago truncatula
Medtr5g083340 2.0kb upstream 2.0kb upstream 4351 true chr5: 35977177-35981527 Medicago truncatula
Medtr5g083340 2.0kb upstream 2.0kb upstream 2000 false chr5: 35979528-35981527 Medicago truncatula
Medtr5g083340 2.0kb downstream 2.0kb downstream 4351 true chr5: 35975177-35979527 Medicago truncatula
Medtr5g083340 2.0kb downstream 2.0kb downstream 2000 false chr5: 35975177-35977176 Medicago truncatula
Medtr5g083340 5.0kb upstream 5.0kb upstream 7351 true chr5: 35977177-35984527 Medicago truncatula
Medtr5g083340 5.0kb upstream 5.0kb upstream 5000 false chr5: 35979528-35984527 Medicago truncatula
Medtr5g083340 5.0kb downstream 5.0kb downstream 7351 true chr5: 35972177-35979527 Medicago truncatula
Medtr5g083340 5.0kb downstream 5.0kb downstream 5000 false chr5: 35972177-35977176 Medicago truncatula
Medtr5g083340 10.0kb upstream 10.0kb upstream 12351 true chr5: 35977177-35989527 Medicago truncatula
Medtr5g083340 10.0kb upstream 10.0kb upstream 10000 false chr5: 35979528-35989527 Medicago truncatula
Medtr5g083340 10.0kb downstream 10.0kb downstream 12351 true chr5: 35967177-35979527 Medicago truncatula
Medtr5g083340 10.0kb downstream 10.0kb downstream 10000 false chr5: 35967177-35977176 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305281 5265 Fabidae View MSA
124068554 5270 Rosid View MSA
123752289 5271 Pentapetalae View MSA
122797550 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.832     High High
cufflinks 1.149       Low
cufflinks 2.587        
cufflinks 5.277        
cufflinks 4.495        
cufflinks 4.012        
cufflinks 14.709     High High
cufflinks 1.756       Low
cufflinks 10.305     High  

0 Strain