Gene : Medtr5g083370 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10555//PTHR10555:SF155 - SORTING NEXIN Description:  sorting nexin 2B
Genomic Order:  4644 Name:  ? Medtr5g083370
Secondary Identifier:  ? PAC:31086988
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g083370 0.5kb upstream 0.5kb upstream 5518 true chr5: 35998684-36004201 Medicago truncatula
Medtr5g083370 0.5kb upstream 0.5kb upstream 500 false chr5: 35998684-35999183 Medicago truncatula
Medtr5g083370 0.5kb downstream 0.5kb downstream 5518 true chr5: 35999184-36004701 Medicago truncatula
Medtr5g083370 0.5kb downstream 0.5kb downstream 500 false chr5: 36004202-36004701 Medicago truncatula
Medtr5g083370 1.0kb upstream 1.0kb upstream 6018 true chr5: 35998184-36004201 Medicago truncatula
Medtr5g083370 1.0kb upstream 1.0kb upstream 1000 false chr5: 35998184-35999183 Medicago truncatula
Medtr5g083370 1.0kb downstream 1.0kb downstream 6018 true chr5: 35999184-36005201 Medicago truncatula
Medtr5g083370 1.0kb downstream 1.0kb downstream 1000 false chr5: 36004202-36005201 Medicago truncatula
Medtr5g083370 2.0kb upstream 2.0kb upstream 7018 true chr5: 35997184-36004201 Medicago truncatula
Medtr5g083370 2.0kb upstream 2.0kb upstream 2000 false chr5: 35997184-35999183 Medicago truncatula
Medtr5g083370 2.0kb downstream 2.0kb downstream 7018 true chr5: 35999184-36006201 Medicago truncatula
Medtr5g083370 2.0kb downstream 2.0kb downstream 2000 false chr5: 36004202-36006201 Medicago truncatula
Medtr5g083370 5.0kb upstream 5.0kb upstream 10018 true chr5: 35994184-36004201 Medicago truncatula
Medtr5g083370 5.0kb upstream 5.0kb upstream 5000 false chr5: 35994184-35999183 Medicago truncatula
Medtr5g083370 5.0kb downstream 5.0kb downstream 10018 true chr5: 35999184-36009201 Medicago truncatula
Medtr5g083370 5.0kb downstream 5.0kb downstream 5000 false chr5: 36004202-36009201 Medicago truncatula
Medtr5g083370 10.0kb upstream 10.0kb upstream 15018 true chr5: 35989184-36004201 Medicago truncatula
Medtr5g083370 10.0kb upstream 10.0kb upstream 10000 false chr5: 35989184-35999183 Medicago truncatula
Medtr5g083370 10.0kb downstream 10.0kb downstream 15018 true chr5: 35999184-36014201 Medicago truncatula
Medtr5g083370 10.0kb downstream 10.0kb downstream 10000 false chr5: 36004202-36014201 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
122302228 5265 Fabidae View MSA
124036661 5270 Rosid View MSA
123749355 5271 Pentapetalae View MSA
122789384 5272 Eudicot View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.886     High High
cufflinks 9.056        
cufflinks 13.926     High  
cufflinks 4.27       Low
cufflinks 7.298        
cufflinks 5.507       Low
cufflinks 13.637     High  
cufflinks 11.965     High  
cufflinks 10.468     High  

0 Strain