Gene : Medtr5g084540 M. truncatula Mt4.0v1
Defline:  (1 of 8) PF07172 - Glycine rich protein family (GRP) Description:  leguminosin group485 secreted peptide
Genomic Order:  4731 Name:  ? Medtr5g084540
Secondary Identifier:  ? PAC:31087827
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g084540 0.5kb upstream 0.5kb upstream 1437 true chr5: 36475530-36476966 Medicago truncatula
Medtr5g084540 0.5kb upstream 0.5kb upstream 500 false chr5: 36476467-36476966 Medicago truncatula
Medtr5g084540 0.5kb downstream 0.5kb downstream 1437 true chr5: 36475030-36476466 Medicago truncatula
Medtr5g084540 0.5kb downstream 0.5kb downstream 500 false chr5: 36475030-36475529 Medicago truncatula
Medtr5g084540 1.0kb upstream 1.0kb upstream 1937 true chr5: 36475530-36477466 Medicago truncatula
Medtr5g084540 1.0kb upstream 1.0kb upstream 1000 false chr5: 36476467-36477466 Medicago truncatula
Medtr5g084540 1.0kb downstream 1.0kb downstream 1937 true chr5: 36474530-36476466 Medicago truncatula
Medtr5g084540 1.0kb downstream 1.0kb downstream 1000 false chr5: 36474530-36475529 Medicago truncatula
Medtr5g084540 2.0kb upstream 2.0kb upstream 2937 true chr5: 36475530-36478466 Medicago truncatula
Medtr5g084540 2.0kb upstream 2.0kb upstream 2000 false chr5: 36476467-36478466 Medicago truncatula
Medtr5g084540 2.0kb downstream 2.0kb downstream 2937 true chr5: 36473530-36476466 Medicago truncatula
Medtr5g084540 2.0kb downstream 2.0kb downstream 2000 false chr5: 36473530-36475529 Medicago truncatula
Medtr5g084540 5.0kb upstream 5.0kb upstream 5937 true chr5: 36475530-36481466 Medicago truncatula
Medtr5g084540 5.0kb upstream 5.0kb upstream 5000 false chr5: 36476467-36481466 Medicago truncatula
Medtr5g084540 5.0kb downstream 5.0kb downstream 5937 true chr5: 36470530-36476466 Medicago truncatula
Medtr5g084540 5.0kb downstream 5.0kb downstream 5000 false chr5: 36470530-36475529 Medicago truncatula
Medtr5g084540 10.0kb upstream 10.0kb upstream 10937 true chr5: 36475530-36486466 Medicago truncatula
Medtr5g084540 10.0kb upstream 10.0kb upstream 10000 false chr5: 36476467-36486466 Medicago truncatula
Medtr5g084540 10.0kb downstream 10.0kb downstream 10937 true chr5: 36465530-36476466 Medicago truncatula
Medtr5g084540 10.0kb downstream 10.0kb downstream 10000 false chr5: 36465530-36475529 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315286 5265 Fabidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.325        
cufflinks 2432.584     High  
cufflinks 3915.355     High  
cufflinks 0.1        
cufflinks 2430.854     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.37        
cufflinks 4107.581     High  
cufflinks 0.032     Low Low

0 Strain