Gene : Medtr5g084530 M. truncatula Mt4.0v1
Defline:  (1 of 8) PF07172 - Glycine rich protein family (GRP) Description:  hypothetical protein
Genomic Order:  4730 Name:  ? Medtr5g084530
Secondary Identifier:  ? PAC:31090144
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g084530 0.5kb upstream 0.5kb upstream 1530 true chr5: 36467719-36469248 Medicago truncatula
Medtr5g084530 0.5kb upstream 0.5kb upstream 500 false chr5: 36468749-36469248 Medicago truncatula
Medtr5g084530 0.5kb downstream 0.5kb downstream 1530 true chr5: 36467219-36468748 Medicago truncatula
Medtr5g084530 0.5kb downstream 0.5kb downstream 500 false chr5: 36467219-36467718 Medicago truncatula
Medtr5g084530 1.0kb upstream 1.0kb upstream 2030 true chr5: 36467719-36469748 Medicago truncatula
Medtr5g084530 1.0kb upstream 1.0kb upstream 1000 false chr5: 36468749-36469748 Medicago truncatula
Medtr5g084530 1.0kb downstream 1.0kb downstream 2030 true chr5: 36466719-36468748 Medicago truncatula
Medtr5g084530 1.0kb downstream 1.0kb downstream 1000 false chr5: 36466719-36467718 Medicago truncatula
Medtr5g084530 2.0kb upstream 2.0kb upstream 3030 true chr5: 36467719-36470748 Medicago truncatula
Medtr5g084530 2.0kb upstream 2.0kb upstream 2000 false chr5: 36468749-36470748 Medicago truncatula
Medtr5g084530 2.0kb downstream 2.0kb downstream 3030 true chr5: 36465719-36468748 Medicago truncatula
Medtr5g084530 2.0kb downstream 2.0kb downstream 2000 false chr5: 36465719-36467718 Medicago truncatula
Medtr5g084530 5.0kb upstream 5.0kb upstream 6030 true chr5: 36467719-36473748 Medicago truncatula
Medtr5g084530 5.0kb upstream 5.0kb upstream 5000 false chr5: 36468749-36473748 Medicago truncatula
Medtr5g084530 5.0kb downstream 5.0kb downstream 6030 true chr5: 36462719-36468748 Medicago truncatula
Medtr5g084530 5.0kb downstream 5.0kb downstream 5000 false chr5: 36462719-36467718 Medicago truncatula
Medtr5g084530 10.0kb upstream 10.0kb upstream 11030 true chr5: 36467719-36478748 Medicago truncatula
Medtr5g084530 10.0kb upstream 10.0kb upstream 10000 false chr5: 36468749-36478748 Medicago truncatula
Medtr5g084530 10.0kb downstream 10.0kb downstream 11030 true chr5: 36457719-36468748 Medicago truncatula
Medtr5g084530 10.0kb downstream 10.0kb downstream 10000 false chr5: 36457719-36467718 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315286 5265 Fabidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.715        
cufflinks 1582.64     High  
cufflinks 1698.029     High  
cufflinks 0.499       Low
cufflinks 1405.419     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.246       Low
cufflinks 1676.632     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain