Gene : Medtr5g084570 M. truncatula Mt4.0v1
Defline:  (1 of 8) PF07172 - Glycine rich protein family (GRP) Description:  leguminosin group485 secreted peptide
Genomic Order:  4734 Name:  ? Medtr5g084570
Secondary Identifier:  ? PAC:31089291
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g084570 0.5kb upstream 0.5kb upstream 1750 true chr5: 36492473-36494222 Medicago truncatula
Medtr5g084570 0.5kb upstream 0.5kb upstream 500 false chr5: 36493723-36494222 Medicago truncatula
Medtr5g084570 0.5kb downstream 0.5kb downstream 1750 true chr5: 36491973-36493722 Medicago truncatula
Medtr5g084570 0.5kb downstream 0.5kb downstream 500 false chr5: 36491973-36492472 Medicago truncatula
Medtr5g084570 1.0kb upstream 1.0kb upstream 2250 true chr5: 36492473-36494722 Medicago truncatula
Medtr5g084570 1.0kb upstream 1.0kb upstream 1000 false chr5: 36493723-36494722 Medicago truncatula
Medtr5g084570 1.0kb downstream 1.0kb downstream 2250 true chr5: 36491473-36493722 Medicago truncatula
Medtr5g084570 1.0kb downstream 1.0kb downstream 1000 false chr5: 36491473-36492472 Medicago truncatula
Medtr5g084570 2.0kb upstream 2.0kb upstream 3250 true chr5: 36492473-36495722 Medicago truncatula
Medtr5g084570 2.0kb upstream 2.0kb upstream 2000 false chr5: 36493723-36495722 Medicago truncatula
Medtr5g084570 2.0kb downstream 2.0kb downstream 3250 true chr5: 36490473-36493722 Medicago truncatula
Medtr5g084570 2.0kb downstream 2.0kb downstream 2000 false chr5: 36490473-36492472 Medicago truncatula
Medtr5g084570 5.0kb upstream 5.0kb upstream 6250 true chr5: 36492473-36498722 Medicago truncatula
Medtr5g084570 5.0kb upstream 5.0kb upstream 5000 false chr5: 36493723-36498722 Medicago truncatula
Medtr5g084570 5.0kb downstream 5.0kb downstream 6250 true chr5: 36487473-36493722 Medicago truncatula
Medtr5g084570 5.0kb downstream 5.0kb downstream 5000 false chr5: 36487473-36492472 Medicago truncatula
Medtr5g084570 10.0kb upstream 10.0kb upstream 11250 true chr5: 36492473-36503722 Medicago truncatula
Medtr5g084570 10.0kb upstream 10.0kb upstream 10000 false chr5: 36493723-36503722 Medicago truncatula
Medtr5g084570 10.0kb downstream 10.0kb downstream 11250 true chr5: 36482473-36493722 Medicago truncatula
Medtr5g084570 10.0kb downstream 10.0kb downstream 10000 false chr5: 36482473-36492472 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315286 5265 Fabidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.82       Low
cufflinks 1147.2     High  
cufflinks 3098.187     High High
cufflinks 7.775        
cufflinks 983.564     High  
cufflinks 15.43     High  
cufflinks 3.646        
cufflinks 2179.856     High High
cufflinks 4.006        

0 Strain