Gene : Medtr5g086350 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12555//PTHR12555:SF14 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 Description:  ubiquitin fusion degradation protein (UFD1), putative
Genomic Order:  4862 Name:  ? Medtr5g086350
Secondary Identifier:  ? PAC:31086639
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g086350 0.5kb upstream 0.5kb upstream 5712 true chr5: 37321496-37327207 Medicago truncatula
Medtr5g086350 0.5kb upstream 0.5kb upstream 500 false chr5: 37321496-37321995 Medicago truncatula
Medtr5g086350 0.5kb downstream 0.5kb downstream 5712 true chr5: 37321996-37327707 Medicago truncatula
Medtr5g086350 0.5kb downstream 0.5kb downstream 500 false chr5: 37327208-37327707 Medicago truncatula
Medtr5g086350 1.0kb upstream 1.0kb upstream 6212 true chr5: 37320996-37327207 Medicago truncatula
Medtr5g086350 1.0kb upstream 1.0kb upstream 1000 false chr5: 37320996-37321995 Medicago truncatula
Medtr5g086350 1.0kb downstream 1.0kb downstream 6212 true chr5: 37321996-37328207 Medicago truncatula
Medtr5g086350 1.0kb downstream 1.0kb downstream 1000 false chr5: 37327208-37328207 Medicago truncatula
Medtr5g086350 2.0kb upstream 2.0kb upstream 7212 true chr5: 37319996-37327207 Medicago truncatula
Medtr5g086350 2.0kb upstream 2.0kb upstream 2000 false chr5: 37319996-37321995 Medicago truncatula
Medtr5g086350 2.0kb downstream 2.0kb downstream 7212 true chr5: 37321996-37329207 Medicago truncatula
Medtr5g086350 2.0kb downstream 2.0kb downstream 2000 false chr5: 37327208-37329207 Medicago truncatula
Medtr5g086350 5.0kb upstream 5.0kb upstream 10212 true chr5: 37316996-37327207 Medicago truncatula
Medtr5g086350 5.0kb upstream 5.0kb upstream 5000 false chr5: 37316996-37321995 Medicago truncatula
Medtr5g086350 5.0kb downstream 5.0kb downstream 10212 true chr5: 37321996-37332207 Medicago truncatula
Medtr5g086350 5.0kb downstream 5.0kb downstream 5000 false chr5: 37327208-37332207 Medicago truncatula
Medtr5g086350 10.0kb upstream 10.0kb upstream 15212 true chr5: 37311996-37327207 Medicago truncatula
Medtr5g086350 10.0kb upstream 10.0kb upstream 10000 false chr5: 37311996-37321995 Medicago truncatula
Medtr5g086350 10.0kb downstream 10.0kb downstream 15212 true chr5: 37321996-37337207 Medicago truncatula
Medtr5g086350 10.0kb downstream 10.0kb downstream 10000 false chr5: 37327208-37337207 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304650 5265 Fabidae View MSA
124065261 5270 Rosid View MSA
123736611 5271 Pentapetalae View MSA
122787635 5272 Eudicot View MSA
122046586 5273 Angiosperm View MSA
121347183 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.472     High High
cufflinks 6.777        
cufflinks 4.674        
cufflinks 4.59        
cufflinks 4.885        
cufflinks 3.3       Low
cufflinks 9.962       High
cufflinks 4.209        
cufflinks 7.029        

0 Strain