Gene : Medtr5g082220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22950//PTHR22950:SF260 - AMINO ACID TRANSPORTER Description:  auxin influx transporter
Genomic Order:  4563 Name:  ? Medtr5g082220
Secondary Identifier:  ? PAC:31088013
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g082220 0.5kb upstream 0.5kb upstream 7167 true chr5: 35319440-35326606 Medicago truncatula
Medtr5g082220 0.5kb upstream 0.5kb upstream 500 false chr5: 35319440-35319939 Medicago truncatula
Medtr5g082220 0.5kb downstream 0.5kb downstream 7167 true chr5: 35319940-35327106 Medicago truncatula
Medtr5g082220 0.5kb downstream 0.5kb downstream 500 false chr5: 35326607-35327106 Medicago truncatula
Medtr5g082220 1.0kb upstream 1.0kb upstream 7667 true chr5: 35318940-35326606 Medicago truncatula
Medtr5g082220 1.0kb upstream 1.0kb upstream 1000 false chr5: 35318940-35319939 Medicago truncatula
Medtr5g082220 1.0kb downstream 1.0kb downstream 7667 true chr5: 35319940-35327606 Medicago truncatula
Medtr5g082220 1.0kb downstream 1.0kb downstream 1000 false chr5: 35326607-35327606 Medicago truncatula
Medtr5g082220 2.0kb upstream 2.0kb upstream 8667 true chr5: 35317940-35326606 Medicago truncatula
Medtr5g082220 2.0kb upstream 2.0kb upstream 2000 false chr5: 35317940-35319939 Medicago truncatula
Medtr5g082220 2.0kb downstream 2.0kb downstream 8667 true chr5: 35319940-35328606 Medicago truncatula
Medtr5g082220 2.0kb downstream 2.0kb downstream 2000 false chr5: 35326607-35328606 Medicago truncatula
Medtr5g082220 5.0kb upstream 5.0kb upstream 11667 true chr5: 35314940-35326606 Medicago truncatula
Medtr5g082220 5.0kb upstream 5.0kb upstream 5000 false chr5: 35314940-35319939 Medicago truncatula
Medtr5g082220 5.0kb downstream 5.0kb downstream 11667 true chr5: 35319940-35331606 Medicago truncatula
Medtr5g082220 5.0kb downstream 5.0kb downstream 5000 false chr5: 35326607-35331606 Medicago truncatula
Medtr5g082220 10.0kb upstream 10.0kb upstream 16667 true chr5: 35309940-35326606 Medicago truncatula
Medtr5g082220 10.0kb upstream 10.0kb upstream 10000 false chr5: 35309940-35319939 Medicago truncatula
Medtr5g082220 10.0kb downstream 10.0kb downstream 16667 true chr5: 35319940-35336606 Medicago truncatula
Medtr5g082220 10.0kb downstream 10.0kb downstream 10000 false chr5: 35326607-35336606 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314633 5265 Fabidae View MSA
124073275 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.947       Low
cufflinks 1.594        
cufflinks 2.29        
cufflinks 1.994        
cufflinks 2.194        
cufflinks 0.883       Low
cufflinks 3.964       High
cufflinks 1.981        
cufflinks 2.992        

0 Strain