Gene : Medtr5g082000 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG2975 - Translation initiation factor 3, subunit f (eIF-3f) Description:  eukaryotic translation initiation factor 3 subunit F
Genomic Order:  4549 Name:  ? Medtr5g082000
Secondary Identifier:  ? PAC:31089994
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g082000 0.5kb upstream 0.5kb upstream 4510 true chr5: 35195812-35200321 Medicago truncatula
Medtr5g082000 0.5kb upstream 0.5kb upstream 500 false chr5: 35199822-35200321 Medicago truncatula
Medtr5g082000 0.5kb downstream 0.5kb downstream 4510 true chr5: 35195312-35199821 Medicago truncatula
Medtr5g082000 0.5kb downstream 0.5kb downstream 500 false chr5: 35195312-35195811 Medicago truncatula
Medtr5g082000 1.0kb upstream 1.0kb upstream 5010 true chr5: 35195812-35200821 Medicago truncatula
Medtr5g082000 1.0kb upstream 1.0kb upstream 1000 false chr5: 35199822-35200821 Medicago truncatula
Medtr5g082000 1.0kb downstream 1.0kb downstream 5010 true chr5: 35194812-35199821 Medicago truncatula
Medtr5g082000 1.0kb downstream 1.0kb downstream 1000 false chr5: 35194812-35195811 Medicago truncatula
Medtr5g082000 2.0kb upstream 2.0kb upstream 6010 true chr5: 35195812-35201821 Medicago truncatula
Medtr5g082000 2.0kb upstream 2.0kb upstream 2000 false chr5: 35199822-35201821 Medicago truncatula
Medtr5g082000 2.0kb downstream 2.0kb downstream 6010 true chr5: 35193812-35199821 Medicago truncatula
Medtr5g082000 2.0kb downstream 2.0kb downstream 2000 false chr5: 35193812-35195811 Medicago truncatula
Medtr5g082000 5.0kb upstream 5.0kb upstream 9010 true chr5: 35195812-35204821 Medicago truncatula
Medtr5g082000 5.0kb upstream 5.0kb upstream 5000 false chr5: 35199822-35204821 Medicago truncatula
Medtr5g082000 5.0kb downstream 5.0kb downstream 9010 true chr5: 35190812-35199821 Medicago truncatula
Medtr5g082000 5.0kb downstream 5.0kb downstream 5000 false chr5: 35190812-35195811 Medicago truncatula
Medtr5g082000 10.0kb upstream 10.0kb upstream 14010 true chr5: 35195812-35209821 Medicago truncatula
Medtr5g082000 10.0kb upstream 10.0kb upstream 10000 false chr5: 35199822-35209821 Medicago truncatula
Medtr5g082000 10.0kb downstream 10.0kb downstream 14010 true chr5: 35185812-35199821 Medicago truncatula
Medtr5g082000 10.0kb downstream 10.0kb downstream 10000 false chr5: 35185812-35195811 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295125 5265 Fabidae View MSA
124064215 5270 Rosid View MSA
123739759 5271 Pentapetalae View MSA
122793083 5272 Eudicot View MSA
122044125 5273 Angiosperm View MSA
121349154 5274 Embryophyte View MSA
123428358 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.192        
cufflinks 2.527       Low
cufflinks 2.909        
cufflinks 6.982       High
cufflinks 3.618        
cufflinks 3.203        
cufflinks 4.175        
cufflinks 2.722        
cufflinks 4.791        

0 Strain