Gene : Medtr5g085480 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR24177:SF52 - ANKYRIN REPEAT FAMILY PROTEIN-RELATED Description:  ankyrin repeat protein
Genomic Order:  4803 Name:  ? Medtr5g085480
Secondary Identifier:  ? PAC:31088198
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g085480 0.5kb upstream 0.5kb upstream 6145 true chr5: 36942660-36948804 Medicago truncatula
Medtr5g085480 0.5kb upstream 0.5kb upstream 500 false chr5: 36942660-36943159 Medicago truncatula
Medtr5g085480 0.5kb downstream 0.5kb downstream 6145 true chr5: 36943160-36949304 Medicago truncatula
Medtr5g085480 0.5kb downstream 0.5kb downstream 500 false chr5: 36948805-36949304 Medicago truncatula
Medtr5g085480 1.0kb upstream 1.0kb upstream 6645 true chr5: 36942160-36948804 Medicago truncatula
Medtr5g085480 1.0kb upstream 1.0kb upstream 1000 false chr5: 36942160-36943159 Medicago truncatula
Medtr5g085480 1.0kb downstream 1.0kb downstream 6645 true chr5: 36943160-36949804 Medicago truncatula
Medtr5g085480 1.0kb downstream 1.0kb downstream 1000 false chr5: 36948805-36949804 Medicago truncatula
Medtr5g085480 2.0kb upstream 2.0kb upstream 7645 true chr5: 36941160-36948804 Medicago truncatula
Medtr5g085480 2.0kb upstream 2.0kb upstream 2000 false chr5: 36941160-36943159 Medicago truncatula
Medtr5g085480 2.0kb downstream 2.0kb downstream 7645 true chr5: 36943160-36950804 Medicago truncatula
Medtr5g085480 2.0kb downstream 2.0kb downstream 2000 false chr5: 36948805-36950804 Medicago truncatula
Medtr5g085480 5.0kb upstream 5.0kb upstream 10645 true chr5: 36938160-36948804 Medicago truncatula
Medtr5g085480 5.0kb upstream 5.0kb upstream 5000 false chr5: 36938160-36943159 Medicago truncatula
Medtr5g085480 5.0kb downstream 5.0kb downstream 10645 true chr5: 36943160-36953804 Medicago truncatula
Medtr5g085480 5.0kb downstream 5.0kb downstream 5000 false chr5: 36948805-36953804 Medicago truncatula
Medtr5g085480 10.0kb upstream 10.0kb upstream 15645 true chr5: 36933160-36948804 Medicago truncatula
Medtr5g085480 10.0kb upstream 10.0kb upstream 10000 false chr5: 36933160-36943159 Medicago truncatula
Medtr5g085480 10.0kb downstream 10.0kb downstream 15645 true chr5: 36943160-36958804 Medicago truncatula
Medtr5g085480 10.0kb downstream 10.0kb downstream 10000 false chr5: 36948805-36958804 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315057 5265 Fabidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low Low
cufflinks 0.121        
cufflinks 0.132        
cufflinks 0.055     Low  
cufflinks 0.137        
cufflinks 0.044     Low  
cufflinks 0.084        
cufflinks 0.191       High
cufflinks 0.048     Low  

0 Strain