Gene : Medtr5g085200 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Description:  zinc finger CCCH domain protein
Genomic Order:  4781 Name:  ? Medtr5g085200
Secondary Identifier:  ? PAC:31088258
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g085200 0.5kb upstream 0.5kb upstream 4360 true chr5: 36772884-36777243 Medicago truncatula
Medtr5g085200 0.5kb upstream 0.5kb upstream 500 false chr5: 36776744-36777243 Medicago truncatula
Medtr5g085200 0.5kb downstream 0.5kb downstream 4360 true chr5: 36772384-36776743 Medicago truncatula
Medtr5g085200 0.5kb downstream 0.5kb downstream 500 false chr5: 36772384-36772883 Medicago truncatula
Medtr5g085200 1.0kb upstream 1.0kb upstream 4860 true chr5: 36772884-36777743 Medicago truncatula
Medtr5g085200 1.0kb upstream 1.0kb upstream 1000 false chr5: 36776744-36777743 Medicago truncatula
Medtr5g085200 1.0kb downstream 1.0kb downstream 4860 true chr5: 36771884-36776743 Medicago truncatula
Medtr5g085200 1.0kb downstream 1.0kb downstream 1000 false chr5: 36771884-36772883 Medicago truncatula
Medtr5g085200 2.0kb upstream 2.0kb upstream 5860 true chr5: 36772884-36778743 Medicago truncatula
Medtr5g085200 2.0kb upstream 2.0kb upstream 2000 false chr5: 36776744-36778743 Medicago truncatula
Medtr5g085200 2.0kb downstream 2.0kb downstream 5860 true chr5: 36770884-36776743 Medicago truncatula
Medtr5g085200 2.0kb downstream 2.0kb downstream 2000 false chr5: 36770884-36772883 Medicago truncatula
Medtr5g085200 5.0kb upstream 5.0kb upstream 8860 true chr5: 36772884-36781743 Medicago truncatula
Medtr5g085200 5.0kb upstream 5.0kb upstream 5000 false chr5: 36776744-36781743 Medicago truncatula
Medtr5g085200 5.0kb downstream 5.0kb downstream 8860 true chr5: 36767884-36776743 Medicago truncatula
Medtr5g085200 5.0kb downstream 5.0kb downstream 5000 false chr5: 36767884-36772883 Medicago truncatula
Medtr5g085200 10.0kb upstream 10.0kb upstream 13860 true chr5: 36772884-36786743 Medicago truncatula
Medtr5g085200 10.0kb upstream 10.0kb upstream 10000 false chr5: 36776744-36786743 Medicago truncatula
Medtr5g085200 10.0kb downstream 10.0kb downstream 13860 true chr5: 36762884-36776743 Medicago truncatula
Medtr5g085200 10.0kb downstream 10.0kb downstream 10000 false chr5: 36762884-36772883 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306300 5265 Fabidae View MSA
124063144 5270 Rosid View MSA
123743724 5271 Pentapetalae View MSA
122789792 5272 Eudicot View MSA
122050864 5273 Angiosperm View MSA
121352088 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.967       High
cufflinks 1.606        
cufflinks 0.989        
cufflinks 2.005        
cufflinks 1.044        
cufflinks 1.432        
cufflinks 3.487        
cufflinks 1.002        
cufflinks 3.098        

0 Strain