Gene : Medtr5g088980 M. truncatula Mt4.0v1
Defline:  (1 of 6) KOG0653 - Cyclin B and related kinase-activating proteins Description:  carboxy-terminal domain cyclin
Genomic Order:  5047 Name:  ? Medtr5g088980
Secondary Identifier:  ? PAC:31087663
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g088980 0.5kb upstream 0.5kb upstream 3664 true chr5: 38633820-38637483 Medicago truncatula
Medtr5g088980 0.5kb upstream 0.5kb upstream 500 false chr5: 38636984-38637483 Medicago truncatula
Medtr5g088980 0.5kb downstream 0.5kb downstream 3664 true chr5: 38633320-38636983 Medicago truncatula
Medtr5g088980 0.5kb downstream 0.5kb downstream 500 false chr5: 38633320-38633819 Medicago truncatula
Medtr5g088980 1.0kb upstream 1.0kb upstream 4164 true chr5: 38633820-38637983 Medicago truncatula
Medtr5g088980 1.0kb upstream 1.0kb upstream 1000 false chr5: 38636984-38637983 Medicago truncatula
Medtr5g088980 1.0kb downstream 1.0kb downstream 4164 true chr5: 38632820-38636983 Medicago truncatula
Medtr5g088980 1.0kb downstream 1.0kb downstream 1000 false chr5: 38632820-38633819 Medicago truncatula
Medtr5g088980 2.0kb upstream 2.0kb upstream 5164 true chr5: 38633820-38638983 Medicago truncatula
Medtr5g088980 2.0kb upstream 2.0kb upstream 2000 false chr5: 38636984-38638983 Medicago truncatula
Medtr5g088980 2.0kb downstream 2.0kb downstream 5164 true chr5: 38631820-38636983 Medicago truncatula
Medtr5g088980 2.0kb downstream 2.0kb downstream 2000 false chr5: 38631820-38633819 Medicago truncatula
Medtr5g088980 5.0kb upstream 5.0kb upstream 8164 true chr5: 38633820-38641983 Medicago truncatula
Medtr5g088980 5.0kb upstream 5.0kb upstream 5000 false chr5: 38636984-38641983 Medicago truncatula
Medtr5g088980 5.0kb downstream 5.0kb downstream 8164 true chr5: 38628820-38636983 Medicago truncatula
Medtr5g088980 5.0kb downstream 5.0kb downstream 5000 false chr5: 38628820-38633819 Medicago truncatula
Medtr5g088980 10.0kb upstream 10.0kb upstream 13164 true chr5: 38633820-38646983 Medicago truncatula
Medtr5g088980 10.0kb upstream 10.0kb upstream 10000 false chr5: 38636984-38646983 Medicago truncatula
Medtr5g088980 10.0kb downstream 10.0kb downstream 13164 true chr5: 38623820-38636983 Medicago truncatula
Medtr5g088980 10.0kb downstream 10.0kb downstream 10000 false chr5: 38623820-38633819 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312424 5265 Fabidae View MSA
124067906 5270 Rosid View MSA
123751880 5271 Pentapetalae View MSA
122796151 5272 Eudicot View MSA
122046684 5273 Angiosperm View MSA
123429011 5275 Viridiplantae View MSA
121349995 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.34       Low
cufflinks 0.647        
cufflinks 0.643        
cufflinks 1.208        
cufflinks 0.456        
cufflinks 0.557        
cufflinks 6.41       High
cufflinks 0.961        
cufflinks 7.607       High

0 Strain