Gene : Medtr5g088850 M. truncatula Mt4.0v1
Defline:  (1 of 72) PF03168 - Late embryogenesis abundant protein (LEA_2) Description:  late embryogenesis abundant protein
Genomic Order:  5039 Name:  ? Medtr5g088850
Secondary Identifier:  ? PAC:31088065
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g088850 0.5kb upstream 0.5kb upstream 3002 true chr5: 38584075-38587076 Medicago truncatula
Medtr5g088850 0.5kb upstream 0.5kb upstream 500 false chr5: 38586577-38587076 Medicago truncatula
Medtr5g088850 0.5kb downstream 0.5kb downstream 3002 true chr5: 38583575-38586576 Medicago truncatula
Medtr5g088850 0.5kb downstream 0.5kb downstream 500 false chr5: 38583575-38584074 Medicago truncatula
Medtr5g088850 1.0kb upstream 1.0kb upstream 3502 true chr5: 38584075-38587576 Medicago truncatula
Medtr5g088850 1.0kb upstream 1.0kb upstream 1000 false chr5: 38586577-38587576 Medicago truncatula
Medtr5g088850 1.0kb downstream 1.0kb downstream 3502 true chr5: 38583075-38586576 Medicago truncatula
Medtr5g088850 1.0kb downstream 1.0kb downstream 1000 false chr5: 38583075-38584074 Medicago truncatula
Medtr5g088850 2.0kb upstream 2.0kb upstream 4502 true chr5: 38584075-38588576 Medicago truncatula
Medtr5g088850 2.0kb upstream 2.0kb upstream 2000 false chr5: 38586577-38588576 Medicago truncatula
Medtr5g088850 2.0kb downstream 2.0kb downstream 4502 true chr5: 38582075-38586576 Medicago truncatula
Medtr5g088850 2.0kb downstream 2.0kb downstream 2000 false chr5: 38582075-38584074 Medicago truncatula
Medtr5g088850 5.0kb upstream 5.0kb upstream 7502 true chr5: 38584075-38591576 Medicago truncatula
Medtr5g088850 5.0kb upstream 5.0kb upstream 5000 false chr5: 38586577-38591576 Medicago truncatula
Medtr5g088850 5.0kb downstream 5.0kb downstream 7502 true chr5: 38579075-38586576 Medicago truncatula
Medtr5g088850 5.0kb downstream 5.0kb downstream 5000 false chr5: 38579075-38584074 Medicago truncatula
Medtr5g088850 10.0kb upstream 10.0kb upstream 12502 true chr5: 38584075-38596576 Medicago truncatula
Medtr5g088850 10.0kb upstream 10.0kb upstream 10000 false chr5: 38586577-38596576 Medicago truncatula
Medtr5g088850 10.0kb downstream 10.0kb downstream 12502 true chr5: 38574075-38586576 Medicago truncatula
Medtr5g088850 10.0kb downstream 10.0kb downstream 10000 false chr5: 38574075-38584074 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309281 5265 Fabidae View MSA
124066390 5270 Rosid View MSA
123747844 5271 Pentapetalae View MSA
122788467 5272 Eudicot View MSA
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.361     High  
cufflinks 13.254     High  
cufflinks 10.621     High  
cufflinks 14.636     High  
cufflinks 12.475     High  
cufflinks 12.12     High  
cufflinks 28.076     High High
cufflinks 9.972     High  
cufflinks 28.846     High High

0 Strain