Gene : Medtr5g088760 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10252:SF36 - HISTONE SUPERFAMILY PROTEIN Description:  negative cofactor 2 transcriptional co-repressor, putative
Genomic Order:  5031 Name:  ? Medtr5g088760
Secondary Identifier:  ? PAC:31085046
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g088760 0.5kb upstream 0.5kb upstream 3943 true chr5: 38539664-38543606 Medicago truncatula
Medtr5g088760 0.5kb upstream 0.5kb upstream 500 false chr5: 38539664-38540163 Medicago truncatula
Medtr5g088760 0.5kb downstream 0.5kb downstream 3943 true chr5: 38540164-38544106 Medicago truncatula
Medtr5g088760 0.5kb downstream 0.5kb downstream 500 false chr5: 38543607-38544106 Medicago truncatula
Medtr5g088760 1.0kb upstream 1.0kb upstream 4443 true chr5: 38539164-38543606 Medicago truncatula
Medtr5g088760 1.0kb upstream 1.0kb upstream 1000 false chr5: 38539164-38540163 Medicago truncatula
Medtr5g088760 1.0kb downstream 1.0kb downstream 4443 true chr5: 38540164-38544606 Medicago truncatula
Medtr5g088760 1.0kb downstream 1.0kb downstream 1000 false chr5: 38543607-38544606 Medicago truncatula
Medtr5g088760 2.0kb upstream 2.0kb upstream 5443 true chr5: 38538164-38543606 Medicago truncatula
Medtr5g088760 2.0kb upstream 2.0kb upstream 2000 false chr5: 38538164-38540163 Medicago truncatula
Medtr5g088760 2.0kb downstream 2.0kb downstream 5443 true chr5: 38540164-38545606 Medicago truncatula
Medtr5g088760 2.0kb downstream 2.0kb downstream 2000 false chr5: 38543607-38545606 Medicago truncatula
Medtr5g088760 5.0kb upstream 5.0kb upstream 8443 true chr5: 38535164-38543606 Medicago truncatula
Medtr5g088760 5.0kb upstream 5.0kb upstream 5000 false chr5: 38535164-38540163 Medicago truncatula
Medtr5g088760 5.0kb downstream 5.0kb downstream 8443 true chr5: 38540164-38548606 Medicago truncatula
Medtr5g088760 5.0kb downstream 5.0kb downstream 5000 false chr5: 38543607-38548606 Medicago truncatula
Medtr5g088760 10.0kb upstream 10.0kb upstream 13443 true chr5: 38530164-38543606 Medicago truncatula
Medtr5g088760 10.0kb upstream 10.0kb upstream 10000 false chr5: 38530164-38540163 Medicago truncatula
Medtr5g088760 10.0kb downstream 10.0kb downstream 13443 true chr5: 38540164-38553606 Medicago truncatula
Medtr5g088760 10.0kb downstream 10.0kb downstream 10000 false chr5: 38543607-38553606 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296525 5265 Fabidae View MSA
124069286 5270 Rosid View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.019       High
cufflinks 0.33       Low
cufflinks 0.629        
cufflinks 0.421        
cufflinks 0.394        
cufflinks 0.693        
cufflinks 1.133       High
cufflinks 0.452        
cufflinks 0.644        

0 Strain