Gene : Medtr5g088730 M. truncatula Mt4.0v1
Defline:  (1 of 20) PF03222 - Tryptophan/tyrosine permease family (Trp_Tyr_perm) Description:  tyrosine-specific transporter, putative
Genomic Order:  5028 Name:  ? Medtr5g088730
Secondary Identifier:  ? PAC:31087852
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g088730 0.5kb upstream 0.5kb upstream 5731 true chr5: 38515762-38521492 Medicago truncatula
Medtr5g088730 0.5kb upstream 0.5kb upstream 500 false chr5: 38520993-38521492 Medicago truncatula
Medtr5g088730 0.5kb downstream 0.5kb downstream 5731 true chr5: 38515262-38520992 Medicago truncatula
Medtr5g088730 0.5kb downstream 0.5kb downstream 500 false chr5: 38515262-38515761 Medicago truncatula
Medtr5g088730 1.0kb upstream 1.0kb upstream 6231 true chr5: 38515762-38521992 Medicago truncatula
Medtr5g088730 1.0kb upstream 1.0kb upstream 1000 false chr5: 38520993-38521992 Medicago truncatula
Medtr5g088730 1.0kb downstream 1.0kb downstream 6231 true chr5: 38514762-38520992 Medicago truncatula
Medtr5g088730 1.0kb downstream 1.0kb downstream 1000 false chr5: 38514762-38515761 Medicago truncatula
Medtr5g088730 2.0kb upstream 2.0kb upstream 7231 true chr5: 38515762-38522992 Medicago truncatula
Medtr5g088730 2.0kb upstream 2.0kb upstream 2000 false chr5: 38520993-38522992 Medicago truncatula
Medtr5g088730 2.0kb downstream 2.0kb downstream 7231 true chr5: 38513762-38520992 Medicago truncatula
Medtr5g088730 2.0kb downstream 2.0kb downstream 2000 false chr5: 38513762-38515761 Medicago truncatula
Medtr5g088730 5.0kb upstream 5.0kb upstream 10231 true chr5: 38515762-38525992 Medicago truncatula
Medtr5g088730 5.0kb upstream 5.0kb upstream 5000 false chr5: 38520993-38525992 Medicago truncatula
Medtr5g088730 5.0kb downstream 5.0kb downstream 10231 true chr5: 38510762-38520992 Medicago truncatula
Medtr5g088730 5.0kb downstream 5.0kb downstream 5000 false chr5: 38510762-38515761 Medicago truncatula
Medtr5g088730 10.0kb upstream 10.0kb upstream 15231 true chr5: 38515762-38530992 Medicago truncatula
Medtr5g088730 10.0kb upstream 10.0kb upstream 10000 false chr5: 38520993-38530992 Medicago truncatula
Medtr5g088730 10.0kb downstream 10.0kb downstream 15231 true chr5: 38505762-38520992 Medicago truncatula
Medtr5g088730 10.0kb downstream 10.0kb downstream 10000 false chr5: 38505762-38515761 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311916 5265 Fabidae View MSA
124064067 5270 Rosid View MSA
123749051 5271 Pentapetalae View MSA
122795247 5272 Eudicot View MSA
122051254 5273 Angiosperm View MSA
121348198 5274 Embryophyte View MSA
123426643 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 2.244        
cufflinks 1.624        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.142        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 1.889        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain