Gene : Medtr5g085860 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11850//PTHR11850:SF112 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Description:  homeobox knotted-like protein
Genomic Order:  4828 Name:  ? Medtr5g085860
Secondary Identifier:  ? PAC:31091729
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g085860 0.5kb upstream 0.5kb upstream 3983 true chr5: 37096795-37100777 Medicago truncatula
Medtr5g085860 0.5kb upstream 0.5kb upstream 500 false chr5: 37100278-37100777 Medicago truncatula
Medtr5g085860 0.5kb downstream 0.5kb downstream 3983 true chr5: 37096295-37100277 Medicago truncatula
Medtr5g085860 0.5kb downstream 0.5kb downstream 500 false chr5: 37096295-37096794 Medicago truncatula
Medtr5g085860 1.0kb upstream 1.0kb upstream 4483 true chr5: 37096795-37101277 Medicago truncatula
Medtr5g085860 1.0kb upstream 1.0kb upstream 1000 false chr5: 37100278-37101277 Medicago truncatula
Medtr5g085860 1.0kb downstream 1.0kb downstream 4483 true chr5: 37095795-37100277 Medicago truncatula
Medtr5g085860 1.0kb downstream 1.0kb downstream 1000 false chr5: 37095795-37096794 Medicago truncatula
Medtr5g085860 2.0kb upstream 2.0kb upstream 5483 true chr5: 37096795-37102277 Medicago truncatula
Medtr5g085860 2.0kb upstream 2.0kb upstream 2000 false chr5: 37100278-37102277 Medicago truncatula
Medtr5g085860 2.0kb downstream 2.0kb downstream 5483 true chr5: 37094795-37100277 Medicago truncatula
Medtr5g085860 2.0kb downstream 2.0kb downstream 2000 false chr5: 37094795-37096794 Medicago truncatula
Medtr5g085860 5.0kb upstream 5.0kb upstream 8483 true chr5: 37096795-37105277 Medicago truncatula
Medtr5g085860 5.0kb upstream 5.0kb upstream 5000 false chr5: 37100278-37105277 Medicago truncatula
Medtr5g085860 5.0kb downstream 5.0kb downstream 8483 true chr5: 37091795-37100277 Medicago truncatula
Medtr5g085860 5.0kb downstream 5.0kb downstream 5000 false chr5: 37091795-37096794 Medicago truncatula
Medtr5g085860 10.0kb upstream 10.0kb upstream 13483 true chr5: 37096795-37110277 Medicago truncatula
Medtr5g085860 10.0kb upstream 10.0kb upstream 10000 false chr5: 37100278-37110277 Medicago truncatula
Medtr5g085860 10.0kb downstream 10.0kb downstream 13483 true chr5: 37086795-37100277 Medicago truncatula
Medtr5g085860 10.0kb downstream 10.0kb downstream 10000 false chr5: 37086795-37096794 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296551 5265 Fabidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain