Gene : Medtr5g085810 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF12796//PF13637//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) // Domain of unknown function (PGG) Description:  ankyrin repeat protein
Genomic Order:  4825 Name:  ? Medtr5g085810
Secondary Identifier:  ? PAC:31091395
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g085810 0.5kb upstream 0.5kb upstream 5303 true chr5: 37069360-37074662 Medicago truncatula
Medtr5g085810 0.5kb upstream 0.5kb upstream 500 false chr5: 37074163-37074662 Medicago truncatula
Medtr5g085810 0.5kb downstream 0.5kb downstream 5303 true chr5: 37068860-37074162 Medicago truncatula
Medtr5g085810 0.5kb downstream 0.5kb downstream 500 false chr5: 37068860-37069359 Medicago truncatula
Medtr5g085810 1.0kb upstream 1.0kb upstream 5803 true chr5: 37069360-37075162 Medicago truncatula
Medtr5g085810 1.0kb upstream 1.0kb upstream 1000 false chr5: 37074163-37075162 Medicago truncatula
Medtr5g085810 1.0kb downstream 1.0kb downstream 5803 true chr5: 37068360-37074162 Medicago truncatula
Medtr5g085810 1.0kb downstream 1.0kb downstream 1000 false chr5: 37068360-37069359 Medicago truncatula
Medtr5g085810 2.0kb upstream 2.0kb upstream 6803 true chr5: 37069360-37076162 Medicago truncatula
Medtr5g085810 2.0kb upstream 2.0kb upstream 2000 false chr5: 37074163-37076162 Medicago truncatula
Medtr5g085810 2.0kb downstream 2.0kb downstream 6803 true chr5: 37067360-37074162 Medicago truncatula
Medtr5g085810 2.0kb downstream 2.0kb downstream 2000 false chr5: 37067360-37069359 Medicago truncatula
Medtr5g085810 5.0kb upstream 5.0kb upstream 9803 true chr5: 37069360-37079162 Medicago truncatula
Medtr5g085810 5.0kb upstream 5.0kb upstream 5000 false chr5: 37074163-37079162 Medicago truncatula
Medtr5g085810 5.0kb downstream 5.0kb downstream 9803 true chr5: 37064360-37074162 Medicago truncatula
Medtr5g085810 5.0kb downstream 5.0kb downstream 5000 false chr5: 37064360-37069359 Medicago truncatula
Medtr5g085810 10.0kb upstream 10.0kb upstream 14803 true chr5: 37069360-37084162 Medicago truncatula
Medtr5g085810 10.0kb upstream 10.0kb upstream 10000 false chr5: 37074163-37084162 Medicago truncatula
Medtr5g085810 10.0kb downstream 10.0kb downstream 14803 true chr5: 37059360-37074162 Medicago truncatula
Medtr5g085810 10.0kb downstream 10.0kb downstream 10000 false chr5: 37059360-37069359 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315057 5265 Fabidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low Low
cufflinks 0.28        
cufflinks 0.284        
cufflinks 0.065     Low  
cufflinks 0.346        
cufflinks 0.023     Low Low
cufflinks 0.221        
cufflinks 0.454       High
cufflinks 0.247        

0 Strain