Gene : Medtr5g075180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31161:SF9 - MYB FAMILY TRANSCRIPTION FACTOR-RELATED Description:  DUF641 family protein
Genomic Order:  4102 Name:  ? Medtr5g075180
Secondary Identifier:  ? PAC:31091032
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g075180 0.5kb upstream 0.5kb upstream 2259 true chr5: 31934881-31937139 Medicago truncatula
Medtr5g075180 0.5kb upstream 0.5kb upstream 500 false chr5: 31934881-31935380 Medicago truncatula
Medtr5g075180 0.5kb downstream 0.5kb downstream 2259 true chr5: 31935381-31937639 Medicago truncatula
Medtr5g075180 0.5kb downstream 0.5kb downstream 500 false chr5: 31937140-31937639 Medicago truncatula
Medtr5g075180 1.0kb upstream 1.0kb upstream 2759 true chr5: 31934381-31937139 Medicago truncatula
Medtr5g075180 1.0kb upstream 1.0kb upstream 1000 false chr5: 31934381-31935380 Medicago truncatula
Medtr5g075180 1.0kb downstream 1.0kb downstream 2759 true chr5: 31935381-31938139 Medicago truncatula
Medtr5g075180 1.0kb downstream 1.0kb downstream 1000 false chr5: 31937140-31938139 Medicago truncatula
Medtr5g075180 2.0kb upstream 2.0kb upstream 3759 true chr5: 31933381-31937139 Medicago truncatula
Medtr5g075180 2.0kb upstream 2.0kb upstream 2000 false chr5: 31933381-31935380 Medicago truncatula
Medtr5g075180 2.0kb downstream 2.0kb downstream 3759 true chr5: 31935381-31939139 Medicago truncatula
Medtr5g075180 2.0kb downstream 2.0kb downstream 2000 false chr5: 31937140-31939139 Medicago truncatula
Medtr5g075180 5.0kb upstream 5.0kb upstream 6759 true chr5: 31930381-31937139 Medicago truncatula
Medtr5g075180 5.0kb upstream 5.0kb upstream 5000 false chr5: 31930381-31935380 Medicago truncatula
Medtr5g075180 5.0kb downstream 5.0kb downstream 6759 true chr5: 31935381-31942139 Medicago truncatula
Medtr5g075180 5.0kb downstream 5.0kb downstream 5000 false chr5: 31937140-31942139 Medicago truncatula
Medtr5g075180 10.0kb upstream 10.0kb upstream 11759 true chr5: 31925381-31937139 Medicago truncatula
Medtr5g075180 10.0kb upstream 10.0kb upstream 10000 false chr5: 31925381-31935380 Medicago truncatula
Medtr5g075180 10.0kb downstream 10.0kb downstream 11759 true chr5: 31935381-31947139 Medicago truncatula
Medtr5g075180 10.0kb downstream 10.0kb downstream 10000 false chr5: 31937140-31947139 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
122304785 5265 Fabidae View MSA
124064348 5270 Rosid View MSA
123740612 5271 Pentapetalae View MSA
122790219 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.192       Low
cufflinks 0.401        
cufflinks 0.206       Low
cufflinks 0.454        
cufflinks 0.744       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.966       High
cufflinks 0.192       Low
cufflinks 0.495        

0 Strain