Gene : Medtr5g075040 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR33257:SF5 - EXPRESSED PROTEIN Description:  hypothetical protein
Genomic Order:  4093 Name:  ? Medtr5g075040
Secondary Identifier:  ? PAC:31088554
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g075040 0.5kb upstream 0.5kb upstream 1504 true chr5: 31875840-31877343 Medicago truncatula
Medtr5g075040 0.5kb upstream 0.5kb upstream 500 false chr5: 31876844-31877343 Medicago truncatula
Medtr5g075040 0.5kb downstream 0.5kb downstream 1504 true chr5: 31875340-31876843 Medicago truncatula
Medtr5g075040 0.5kb downstream 0.5kb downstream 500 false chr5: 31875340-31875839 Medicago truncatula
Medtr5g075040 1.0kb upstream 1.0kb upstream 2004 true chr5: 31875840-31877843 Medicago truncatula
Medtr5g075040 1.0kb upstream 1.0kb upstream 1000 false chr5: 31876844-31877843 Medicago truncatula
Medtr5g075040 1.0kb downstream 1.0kb downstream 2004 true chr5: 31874840-31876843 Medicago truncatula
Medtr5g075040 1.0kb downstream 1.0kb downstream 1000 false chr5: 31874840-31875839 Medicago truncatula
Medtr5g075040 2.0kb upstream 2.0kb upstream 3004 true chr5: 31875840-31878843 Medicago truncatula
Medtr5g075040 2.0kb upstream 2.0kb upstream 2000 false chr5: 31876844-31878843 Medicago truncatula
Medtr5g075040 2.0kb downstream 2.0kb downstream 3004 true chr5: 31873840-31876843 Medicago truncatula
Medtr5g075040 2.0kb downstream 2.0kb downstream 2000 false chr5: 31873840-31875839 Medicago truncatula
Medtr5g075040 5.0kb upstream 5.0kb upstream 6004 true chr5: 31875840-31881843 Medicago truncatula
Medtr5g075040 5.0kb upstream 5.0kb upstream 5000 false chr5: 31876844-31881843 Medicago truncatula
Medtr5g075040 5.0kb downstream 5.0kb downstream 6004 true chr5: 31870840-31876843 Medicago truncatula
Medtr5g075040 5.0kb downstream 5.0kb downstream 5000 false chr5: 31870840-31875839 Medicago truncatula
Medtr5g075040 10.0kb upstream 10.0kb upstream 11004 true chr5: 31875840-31886843 Medicago truncatula
Medtr5g075040 10.0kb upstream 10.0kb upstream 10000 false chr5: 31876844-31886843 Medicago truncatula
Medtr5g075040 10.0kb downstream 10.0kb downstream 11004 true chr5: 31865840-31876843 Medicago truncatula
Medtr5g075040 10.0kb downstream 10.0kb downstream 10000 false chr5: 31865840-31875839 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297521 5265 Fabidae View MSA
124037552 5270 Rosid View MSA
123743182 5271 Pentapetalae View MSA
122790998 5272 Eudicot View MSA
122050526 5273 Angiosperm View MSA
121311968 5274 Embryophyte View MSA
123349191 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.254        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.762        
cufflinks 0.115       Low
cufflinks 3.205        
cufflinks 3.576        
cufflinks 0.044     Low Low
cufflinks 4.843        

0 Strain