Gene : Medtr5g075330 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23249:SF15 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 4 Description:  trafficking protein particle complex subunit-like protein
Genomic Order:  4113 Name:  ? Medtr5g075330
Secondary Identifier:  ? PAC:31090069
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g075330 0.5kb upstream 0.5kb upstream 3670 true chr5: 32004338-32008007 Medicago truncatula
Medtr5g075330 0.5kb upstream 0.5kb upstream 500 false chr5: 32007508-32008007 Medicago truncatula
Medtr5g075330 0.5kb downstream 0.5kb downstream 3670 true chr5: 32003838-32007507 Medicago truncatula
Medtr5g075330 0.5kb downstream 0.5kb downstream 500 false chr5: 32003838-32004337 Medicago truncatula
Medtr5g075330 1.0kb upstream 1.0kb upstream 4170 true chr5: 32004338-32008507 Medicago truncatula
Medtr5g075330 1.0kb upstream 1.0kb upstream 1000 false chr5: 32007508-32008507 Medicago truncatula
Medtr5g075330 1.0kb downstream 1.0kb downstream 4170 true chr5: 32003338-32007507 Medicago truncatula
Medtr5g075330 1.0kb downstream 1.0kb downstream 1000 false chr5: 32003338-32004337 Medicago truncatula
Medtr5g075330 2.0kb upstream 2.0kb upstream 5170 true chr5: 32004338-32009507 Medicago truncatula
Medtr5g075330 2.0kb upstream 2.0kb upstream 2000 false chr5: 32007508-32009507 Medicago truncatula
Medtr5g075330 2.0kb downstream 2.0kb downstream 5170 true chr5: 32002338-32007507 Medicago truncatula
Medtr5g075330 2.0kb downstream 2.0kb downstream 2000 false chr5: 32002338-32004337 Medicago truncatula
Medtr5g075330 5.0kb upstream 5.0kb upstream 8170 true chr5: 32004338-32012507 Medicago truncatula
Medtr5g075330 5.0kb upstream 5.0kb upstream 5000 false chr5: 32007508-32012507 Medicago truncatula
Medtr5g075330 5.0kb downstream 5.0kb downstream 8170 true chr5: 31999338-32007507 Medicago truncatula
Medtr5g075330 5.0kb downstream 5.0kb downstream 5000 false chr5: 31999338-32004337 Medicago truncatula
Medtr5g075330 10.0kb upstream 10.0kb upstream 13170 true chr5: 32004338-32017507 Medicago truncatula
Medtr5g075330 10.0kb upstream 10.0kb upstream 10000 false chr5: 32007508-32017507 Medicago truncatula
Medtr5g075330 10.0kb downstream 10.0kb downstream 13170 true chr5: 31994338-32007507 Medicago truncatula
Medtr5g075330 10.0kb downstream 10.0kb downstream 10000 false chr5: 31994338-32004337 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312877 5265 Fabidae View MSA
124062773 5270 Rosid View MSA
123740967 5271 Pentapetalae View MSA
122786625 5272 Eudicot View MSA
122043161 5273 Angiosperm View MSA
121347078 5274 Embryophyte View MSA
123424121 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.594       Low
cufflinks 1.359        
cufflinks 1.219        
cufflinks 1.379        
cufflinks 1.397        
cufflinks 0.89        
cufflinks 1.254        
cufflinks 1.159        
cufflinks 1.535        

0 Strain