Gene : Medtr5g074550 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31087:SF16 - PROTEIN LURP-ONE-RELATED 7 Description:  tubby C 2 protein
Genomic Order:  4062 Name:  ? Medtr5g074550
Secondary Identifier:  ? PAC:31088263
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g074550 0.5kb upstream 0.5kb upstream 3116 true chr5: 31687451-31690566 Medicago truncatula
Medtr5g074550 0.5kb upstream 0.5kb upstream 500 false chr5: 31690067-31690566 Medicago truncatula
Medtr5g074550 0.5kb downstream 0.5kb downstream 3116 true chr5: 31686951-31690066 Medicago truncatula
Medtr5g074550 0.5kb downstream 0.5kb downstream 500 false chr5: 31686951-31687450 Medicago truncatula
Medtr5g074550 1.0kb upstream 1.0kb upstream 3616 true chr5: 31687451-31691066 Medicago truncatula
Medtr5g074550 1.0kb upstream 1.0kb upstream 1000 false chr5: 31690067-31691066 Medicago truncatula
Medtr5g074550 1.0kb downstream 1.0kb downstream 3616 true chr5: 31686451-31690066 Medicago truncatula
Medtr5g074550 1.0kb downstream 1.0kb downstream 1000 false chr5: 31686451-31687450 Medicago truncatula
Medtr5g074550 2.0kb upstream 2.0kb upstream 4616 true chr5: 31687451-31692066 Medicago truncatula
Medtr5g074550 2.0kb upstream 2.0kb upstream 2000 false chr5: 31690067-31692066 Medicago truncatula
Medtr5g074550 2.0kb downstream 2.0kb downstream 4616 true chr5: 31685451-31690066 Medicago truncatula
Medtr5g074550 2.0kb downstream 2.0kb downstream 2000 false chr5: 31685451-31687450 Medicago truncatula
Medtr5g074550 5.0kb upstream 5.0kb upstream 7616 true chr5: 31687451-31695066 Medicago truncatula
Medtr5g074550 5.0kb upstream 5.0kb upstream 5000 false chr5: 31690067-31695066 Medicago truncatula
Medtr5g074550 5.0kb downstream 5.0kb downstream 7616 true chr5: 31682451-31690066 Medicago truncatula
Medtr5g074550 5.0kb downstream 5.0kb downstream 5000 false chr5: 31682451-31687450 Medicago truncatula
Medtr5g074550 10.0kb upstream 10.0kb upstream 12616 true chr5: 31687451-31700066 Medicago truncatula
Medtr5g074550 10.0kb upstream 10.0kb upstream 10000 false chr5: 31690067-31700066 Medicago truncatula
Medtr5g074550 10.0kb downstream 10.0kb downstream 12616 true chr5: 31677451-31690066 Medicago truncatula
Medtr5g074550 10.0kb downstream 10.0kb downstream 10000 false chr5: 31677451-31687450 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299020 5265 Fabidae View MSA
124062628 5270 Rosid View MSA
123751471 5271 Pentapetalae View MSA
122788840 5272 Eudicot View MSA
122049956 5273 Angiosperm View MSA
121351653 5274 Embryophyte View MSA
123382260 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.834        
cufflinks 0.474        
cufflinks 0.557        
cufflinks 1.954       High
cufflinks 0.512        
cufflinks 0.94        
cufflinks 1.441        
cufflinks 0.397       Low
cufflinks 2.549       High

0 Strain