Gene : Medtr5g075540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 Description:  ribose-phosphate pyrophosphokinase
Genomic Order:  4129 Name:  ? Medtr5g075540
Secondary Identifier:  ? PAC:31089372
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-662 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g075540 0.5kb upstream 0.5kb upstream 6259 true chr5: 32120699-32126957 Medicago truncatula
Medtr5g075540 0.5kb upstream 0.5kb upstream 500 false chr5: 32126458-32126957 Medicago truncatula
Medtr5g075540 0.5kb downstream 0.5kb downstream 6259 true chr5: 32120199-32126457 Medicago truncatula
Medtr5g075540 0.5kb downstream 0.5kb downstream 500 false chr5: 32120199-32120698 Medicago truncatula
Medtr5g075540 1.0kb upstream 1.0kb upstream 6759 true chr5: 32120699-32127457 Medicago truncatula
Medtr5g075540 1.0kb upstream 1.0kb upstream 1000 false chr5: 32126458-32127457 Medicago truncatula
Medtr5g075540 1.0kb downstream 1.0kb downstream 6759 true chr5: 32119699-32126457 Medicago truncatula
Medtr5g075540 1.0kb downstream 1.0kb downstream 1000 false chr5: 32119699-32120698 Medicago truncatula
Medtr5g075540 2.0kb upstream 2.0kb upstream 7759 true chr5: 32120699-32128457 Medicago truncatula
Medtr5g075540 2.0kb upstream 2.0kb upstream 2000 false chr5: 32126458-32128457 Medicago truncatula
Medtr5g075540 2.0kb downstream 2.0kb downstream 7759 true chr5: 32118699-32126457 Medicago truncatula
Medtr5g075540 2.0kb downstream 2.0kb downstream 2000 false chr5: 32118699-32120698 Medicago truncatula
Medtr5g075540 5.0kb upstream 5.0kb upstream 10759 true chr5: 32120699-32131457 Medicago truncatula
Medtr5g075540 5.0kb upstream 5.0kb upstream 5000 false chr5: 32126458-32131457 Medicago truncatula
Medtr5g075540 5.0kb downstream 5.0kb downstream 10759 true chr5: 32115699-32126457 Medicago truncatula
Medtr5g075540 5.0kb downstream 5.0kb downstream 5000 false chr5: 32115699-32120698 Medicago truncatula
Medtr5g075540 10.0kb upstream 10.0kb upstream 15759 true chr5: 32120699-32136457 Medicago truncatula
Medtr5g075540 10.0kb upstream 10.0kb upstream 10000 false chr5: 32126458-32136457 Medicago truncatula
Medtr5g075540 10.0kb downstream 10.0kb downstream 15759 true chr5: 32110699-32126457 Medicago truncatula
Medtr5g075540 10.0kb downstream 10.0kb downstream 10000 false chr5: 32110699-32120698 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299251 5265 Fabidae View MSA
124063296 5270 Rosid View MSA
123738822 5271 Pentapetalae View MSA
122786228 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.567        
cufflinks 2.114        
cufflinks 2.029        
cufflinks 1.639       Low
cufflinks 2.876        
cufflinks 1.511       Low
cufflinks 3.039       High
cufflinks 1.913        
cufflinks 3.283       High

0 Strain