Gene : Medtr5g077080 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10566:SF59 - SERINE/THREONINE-PROTEIN KINASE ABKD-RELATED Description:  aarF domain kinase
Genomic Order:  4235 Name:  ? Medtr5g077080
Secondary Identifier:  ? PAC:31090737
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g077080 0.5kb upstream 0.5kb upstream 8980 true chr5: 32881319-32890298 Medicago truncatula
Medtr5g077080 0.5kb upstream 0.5kb upstream 500 false chr5: 32881319-32881818 Medicago truncatula
Medtr5g077080 0.5kb downstream 0.5kb downstream 8980 true chr5: 32881819-32890798 Medicago truncatula
Medtr5g077080 0.5kb downstream 0.5kb downstream 500 false chr5: 32890299-32890798 Medicago truncatula
Medtr5g077080 1.0kb upstream 1.0kb upstream 9480 true chr5: 32880819-32890298 Medicago truncatula
Medtr5g077080 1.0kb upstream 1.0kb upstream 1000 false chr5: 32880819-32881818 Medicago truncatula
Medtr5g077080 1.0kb downstream 1.0kb downstream 9480 true chr5: 32881819-32891298 Medicago truncatula
Medtr5g077080 1.0kb downstream 1.0kb downstream 1000 false chr5: 32890299-32891298 Medicago truncatula
Medtr5g077080 2.0kb upstream 2.0kb upstream 10480 true chr5: 32879819-32890298 Medicago truncatula
Medtr5g077080 2.0kb upstream 2.0kb upstream 2000 false chr5: 32879819-32881818 Medicago truncatula
Medtr5g077080 2.0kb downstream 2.0kb downstream 10480 true chr5: 32881819-32892298 Medicago truncatula
Medtr5g077080 2.0kb downstream 2.0kb downstream 2000 false chr5: 32890299-32892298 Medicago truncatula
Medtr5g077080 5.0kb upstream 5.0kb upstream 13480 true chr5: 32876819-32890298 Medicago truncatula
Medtr5g077080 5.0kb upstream 5.0kb upstream 5000 false chr5: 32876819-32881818 Medicago truncatula
Medtr5g077080 5.0kb downstream 5.0kb downstream 13480 true chr5: 32881819-32895298 Medicago truncatula
Medtr5g077080 5.0kb downstream 5.0kb downstream 5000 false chr5: 32890299-32895298 Medicago truncatula
Medtr5g077080 10.0kb upstream 10.0kb upstream 18480 true chr5: 32871819-32890298 Medicago truncatula
Medtr5g077080 10.0kb upstream 10.0kb upstream 10000 false chr5: 32871819-32881818 Medicago truncatula
Medtr5g077080 10.0kb downstream 10.0kb downstream 18480 true chr5: 32881819-32900298 Medicago truncatula
Medtr5g077080 10.0kb downstream 10.0kb downstream 10000 false chr5: 32890299-32900298 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304531 5265 Fabidae View MSA
124050405 5270 Rosid View MSA
123740532 5271 Pentapetalae View MSA
122793151 5272 Eudicot View MSA
122044074 5273 Angiosperm View MSA
121346722 5274 Embryophyte View MSA
123427066 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.199        
cufflinks 0.502        
cufflinks 1.01       High
cufflinks 0.125       Low
cufflinks 0.627        
cufflinks 0.332        
cufflinks 0.134       Low
cufflinks 0.745       High
cufflinks 0.198        

0 Strain