Gene : Medtr5g075840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11999//PTHR11999:SF105 - GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE Description:  glutamate decarboxylase, putative
Genomic Order:  4145 Name:  ? Medtr5g075840
Secondary Identifier:  ? PAC:31090489
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLUDEG-I-PWY Medicago truncatula pathologic  
Mtruncatula PWY0-1305 Medicago truncatula pathologic  
Mtruncatula PWY-4321 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g075840 0.5kb upstream 0.5kb upstream 1133 true chr5: 32263555-32264687 Medicago truncatula
Medtr5g075840 0.5kb upstream 0.5kb upstream 500 false chr5: 32263555-32264054 Medicago truncatula
Medtr5g075840 0.5kb downstream 0.5kb downstream 1133 true chr5: 32264055-32265187 Medicago truncatula
Medtr5g075840 0.5kb downstream 0.5kb downstream 500 false chr5: 32264688-32265187 Medicago truncatula
Medtr5g075840 1.0kb upstream 1.0kb upstream 1633 true chr5: 32263055-32264687 Medicago truncatula
Medtr5g075840 1.0kb upstream 1.0kb upstream 1000 false chr5: 32263055-32264054 Medicago truncatula
Medtr5g075840 1.0kb downstream 1.0kb downstream 1633 true chr5: 32264055-32265687 Medicago truncatula
Medtr5g075840 1.0kb downstream 1.0kb downstream 1000 false chr5: 32264688-32265687 Medicago truncatula
Medtr5g075840 2.0kb upstream 2.0kb upstream 2633 true chr5: 32262055-32264687 Medicago truncatula
Medtr5g075840 2.0kb upstream 2.0kb upstream 2000 false chr5: 32262055-32264054 Medicago truncatula
Medtr5g075840 2.0kb downstream 2.0kb downstream 2633 true chr5: 32264055-32266687 Medicago truncatula
Medtr5g075840 2.0kb downstream 2.0kb downstream 2000 false chr5: 32264688-32266687 Medicago truncatula
Medtr5g075840 5.0kb upstream 5.0kb upstream 5633 true chr5: 32259055-32264687 Medicago truncatula
Medtr5g075840 5.0kb upstream 5.0kb upstream 5000 false chr5: 32259055-32264054 Medicago truncatula
Medtr5g075840 5.0kb downstream 5.0kb downstream 5633 true chr5: 32264055-32269687 Medicago truncatula
Medtr5g075840 5.0kb downstream 5.0kb downstream 5000 false chr5: 32264688-32269687 Medicago truncatula
Medtr5g075840 10.0kb upstream 10.0kb upstream 10633 true chr5: 32254055-32264687 Medicago truncatula
Medtr5g075840 10.0kb upstream 10.0kb upstream 10000 false chr5: 32254055-32264054 Medicago truncatula
Medtr5g075840 10.0kb downstream 10.0kb downstream 10633 true chr5: 32264055-32274687 Medicago truncatula
Medtr5g075840 10.0kb downstream 10.0kb downstream 10000 false chr5: 32264688-32274687 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288983 5265 Fabidae View MSA
124038628 5270 Rosid View MSA
123610905 5271 Pentapetalae View MSA
122645493 5272 Eudicot View MSA
122049828 5273 Angiosperm View MSA
121311607 5274 Embryophyte View MSA
123348883 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain