Gene : Medtr5g077260 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12925:SF0 - PROTEIN HIKESHI Description:  OPI10-like protein
Genomic Order:  4245 Name:  ? Medtr5g077260
Secondary Identifier:  ? PAC:31088817
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g077260 0.5kb upstream 0.5kb upstream 1665 true chr5: 32978843-32980507 Medicago truncatula
Medtr5g077260 0.5kb upstream 0.5kb upstream 500 false chr5: 32978843-32979342 Medicago truncatula
Medtr5g077260 0.5kb downstream 0.5kb downstream 1665 true chr5: 32979343-32981007 Medicago truncatula
Medtr5g077260 0.5kb downstream 0.5kb downstream 500 false chr5: 32980508-32981007 Medicago truncatula
Medtr5g077260 1.0kb upstream 1.0kb upstream 2165 true chr5: 32978343-32980507 Medicago truncatula
Medtr5g077260 1.0kb upstream 1.0kb upstream 1000 false chr5: 32978343-32979342 Medicago truncatula
Medtr5g077260 1.0kb downstream 1.0kb downstream 2165 true chr5: 32979343-32981507 Medicago truncatula
Medtr5g077260 1.0kb downstream 1.0kb downstream 1000 false chr5: 32980508-32981507 Medicago truncatula
Medtr5g077260 2.0kb upstream 2.0kb upstream 3165 true chr5: 32977343-32980507 Medicago truncatula
Medtr5g077260 2.0kb upstream 2.0kb upstream 2000 false chr5: 32977343-32979342 Medicago truncatula
Medtr5g077260 2.0kb downstream 2.0kb downstream 3165 true chr5: 32979343-32982507 Medicago truncatula
Medtr5g077260 2.0kb downstream 2.0kb downstream 2000 false chr5: 32980508-32982507 Medicago truncatula
Medtr5g077260 5.0kb upstream 5.0kb upstream 6165 true chr5: 32974343-32980507 Medicago truncatula
Medtr5g077260 5.0kb upstream 5.0kb upstream 5000 false chr5: 32974343-32979342 Medicago truncatula
Medtr5g077260 5.0kb downstream 5.0kb downstream 6165 true chr5: 32979343-32985507 Medicago truncatula
Medtr5g077260 5.0kb downstream 5.0kb downstream 5000 false chr5: 32980508-32985507 Medicago truncatula
Medtr5g077260 10.0kb upstream 10.0kb upstream 11165 true chr5: 32969343-32980507 Medicago truncatula
Medtr5g077260 10.0kb upstream 10.0kb upstream 10000 false chr5: 32969343-32979342 Medicago truncatula
Medtr5g077260 10.0kb downstream 10.0kb downstream 11165 true chr5: 32979343-32990507 Medicago truncatula
Medtr5g077260 10.0kb downstream 10.0kb downstream 10000 false chr5: 32980508-32990507 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301597 5265 Fabidae View MSA
124064683 5270 Rosid View MSA
123740283 5271 Pentapetalae View MSA
122791850 5272 Eudicot View MSA
122044077 5273 Angiosperm View MSA
121345488 5274 Embryophyte View MSA
123425277 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.623        
cufflinks 3.394        
cufflinks 2.03       Low
cufflinks 7.1        
cufflinks 3.8        
cufflinks 4.638        
cufflinks 8.204       High
cufflinks 2.07       Low
cufflinks 8.377       High

0 Strain