Gene : Medtr5g081040 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12822:SF5 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Description:  integral membrane Yip1 family protein
Genomic Order:  4480 Name:  ? Medtr5g081040
Secondary Identifier:  ? PAC:31089895
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g081040 0.5kb upstream 0.5kb upstream 4829 true chr5: 34687538-34692366 Medicago truncatula
Medtr5g081040 0.5kb upstream 0.5kb upstream 500 false chr5: 34691867-34692366 Medicago truncatula
Medtr5g081040 0.5kb downstream 0.5kb downstream 4829 true chr5: 34687038-34691866 Medicago truncatula
Medtr5g081040 0.5kb downstream 0.5kb downstream 500 false chr5: 34687038-34687537 Medicago truncatula
Medtr5g081040 1.0kb upstream 1.0kb upstream 5329 true chr5: 34687538-34692866 Medicago truncatula
Medtr5g081040 1.0kb upstream 1.0kb upstream 1000 false chr5: 34691867-34692866 Medicago truncatula
Medtr5g081040 1.0kb downstream 1.0kb downstream 5329 true chr5: 34686538-34691866 Medicago truncatula
Medtr5g081040 1.0kb downstream 1.0kb downstream 1000 false chr5: 34686538-34687537 Medicago truncatula
Medtr5g081040 2.0kb upstream 2.0kb upstream 6329 true chr5: 34687538-34693866 Medicago truncatula
Medtr5g081040 2.0kb upstream 2.0kb upstream 2000 false chr5: 34691867-34693866 Medicago truncatula
Medtr5g081040 2.0kb downstream 2.0kb downstream 6329 true chr5: 34685538-34691866 Medicago truncatula
Medtr5g081040 2.0kb downstream 2.0kb downstream 2000 false chr5: 34685538-34687537 Medicago truncatula
Medtr5g081040 5.0kb upstream 5.0kb upstream 9329 true chr5: 34687538-34696866 Medicago truncatula
Medtr5g081040 5.0kb upstream 5.0kb upstream 5000 false chr5: 34691867-34696866 Medicago truncatula
Medtr5g081040 5.0kb downstream 5.0kb downstream 9329 true chr5: 34682538-34691866 Medicago truncatula
Medtr5g081040 5.0kb downstream 5.0kb downstream 5000 false chr5: 34682538-34687537 Medicago truncatula
Medtr5g081040 10.0kb upstream 10.0kb upstream 14329 true chr5: 34687538-34701866 Medicago truncatula
Medtr5g081040 10.0kb upstream 10.0kb upstream 10000 false chr5: 34691867-34701866 Medicago truncatula
Medtr5g081040 10.0kb downstream 10.0kb downstream 14329 true chr5: 34677538-34691866 Medicago truncatula
Medtr5g081040 10.0kb downstream 10.0kb downstream 10000 false chr5: 34677538-34687537 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305313 5265 Fabidae View MSA
124061119 5270 Rosid View MSA
123736433 5271 Pentapetalae View MSA
122791105 5272 Eudicot View MSA
122048759 5273 Angiosperm View MSA
121311097 5274 Embryophyte View MSA
123427303 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.113        
cufflinks 1.495        
cufflinks 2.967       High
cufflinks 1.506        
cufflinks 1.041        
cufflinks 1.519        
cufflinks 2.575        
cufflinks 0.868       Low
cufflinks 3.235       High

0 Strain