Gene : Medtr5g080470 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31529:SF6 - LOB DOMAIN-CONTAINING PROTEIN 33 Description:  LOB domain protein
Genomic Order:  4443 Name:  ? Medtr5g080470
Secondary Identifier:  ? PAC:31085909
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g080470 0.5kb upstream 0.5kb upstream 1890 true chr5: 34446105-34447994 Medicago truncatula
Medtr5g080470 0.5kb upstream 0.5kb upstream 500 false chr5: 34446105-34446604 Medicago truncatula
Medtr5g080470 0.5kb downstream 0.5kb downstream 1890 true chr5: 34446605-34448494 Medicago truncatula
Medtr5g080470 0.5kb downstream 0.5kb downstream 500 false chr5: 34447995-34448494 Medicago truncatula
Medtr5g080470 1.0kb upstream 1.0kb upstream 2390 true chr5: 34445605-34447994 Medicago truncatula
Medtr5g080470 1.0kb upstream 1.0kb upstream 1000 false chr5: 34445605-34446604 Medicago truncatula
Medtr5g080470 1.0kb downstream 1.0kb downstream 2390 true chr5: 34446605-34448994 Medicago truncatula
Medtr5g080470 1.0kb downstream 1.0kb downstream 1000 false chr5: 34447995-34448994 Medicago truncatula
Medtr5g080470 2.0kb upstream 2.0kb upstream 3390 true chr5: 34444605-34447994 Medicago truncatula
Medtr5g080470 2.0kb upstream 2.0kb upstream 2000 false chr5: 34444605-34446604 Medicago truncatula
Medtr5g080470 2.0kb downstream 2.0kb downstream 3390 true chr5: 34446605-34449994 Medicago truncatula
Medtr5g080470 2.0kb downstream 2.0kb downstream 2000 false chr5: 34447995-34449994 Medicago truncatula
Medtr5g080470 5.0kb upstream 5.0kb upstream 6390 true chr5: 34441605-34447994 Medicago truncatula
Medtr5g080470 5.0kb upstream 5.0kb upstream 5000 false chr5: 34441605-34446604 Medicago truncatula
Medtr5g080470 5.0kb downstream 5.0kb downstream 6390 true chr5: 34446605-34452994 Medicago truncatula
Medtr5g080470 5.0kb downstream 5.0kb downstream 5000 false chr5: 34447995-34452994 Medicago truncatula
Medtr5g080470 10.0kb upstream 10.0kb upstream 11390 true chr5: 34436605-34447994 Medicago truncatula
Medtr5g080470 10.0kb upstream 10.0kb upstream 10000 false chr5: 34436605-34446604 Medicago truncatula
Medtr5g080470 10.0kb downstream 10.0kb downstream 11390 true chr5: 34446605-34457994 Medicago truncatula
Medtr5g080470 10.0kb downstream 10.0kb downstream 10000 false chr5: 34447995-34457994 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300328 5265 Fabidae View MSA
124067335 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.064     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.138       High
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain