Gene : Medtr5g078090 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11711:SF152 - ADP-RIBOSYLATION FACTOR-LIKE A1A Description:  ADP-ribosylation factor-like protein A1D
Genomic Order:  4302 Name:  ? Medtr5g078090
Secondary Identifier:  ? PAC:31088029
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g078090 0.5kb upstream 0.5kb upstream 5162 true chr5: 33348857-33354018 Medicago truncatula
Medtr5g078090 0.5kb upstream 0.5kb upstream 500 false chr5: 33353519-33354018 Medicago truncatula
Medtr5g078090 0.5kb downstream 0.5kb downstream 5162 true chr5: 33348357-33353518 Medicago truncatula
Medtr5g078090 0.5kb downstream 0.5kb downstream 500 false chr5: 33348357-33348856 Medicago truncatula
Medtr5g078090 1.0kb upstream 1.0kb upstream 5662 true chr5: 33348857-33354518 Medicago truncatula
Medtr5g078090 1.0kb upstream 1.0kb upstream 1000 false chr5: 33353519-33354518 Medicago truncatula
Medtr5g078090 1.0kb downstream 1.0kb downstream 5662 true chr5: 33347857-33353518 Medicago truncatula
Medtr5g078090 1.0kb downstream 1.0kb downstream 1000 false chr5: 33347857-33348856 Medicago truncatula
Medtr5g078090 2.0kb upstream 2.0kb upstream 6662 true chr5: 33348857-33355518 Medicago truncatula
Medtr5g078090 2.0kb upstream 2.0kb upstream 2000 false chr5: 33353519-33355518 Medicago truncatula
Medtr5g078090 2.0kb downstream 2.0kb downstream 6662 true chr5: 33346857-33353518 Medicago truncatula
Medtr5g078090 2.0kb downstream 2.0kb downstream 2000 false chr5: 33346857-33348856 Medicago truncatula
Medtr5g078090 5.0kb upstream 5.0kb upstream 9662 true chr5: 33348857-33358518 Medicago truncatula
Medtr5g078090 5.0kb upstream 5.0kb upstream 5000 false chr5: 33353519-33358518 Medicago truncatula
Medtr5g078090 5.0kb downstream 5.0kb downstream 9662 true chr5: 33343857-33353518 Medicago truncatula
Medtr5g078090 5.0kb downstream 5.0kb downstream 5000 false chr5: 33343857-33348856 Medicago truncatula
Medtr5g078090 10.0kb upstream 10.0kb upstream 14662 true chr5: 33348857-33363518 Medicago truncatula
Medtr5g078090 10.0kb upstream 10.0kb upstream 10000 false chr5: 33353519-33363518 Medicago truncatula
Medtr5g078090 10.0kb downstream 10.0kb downstream 14662 true chr5: 33338857-33353518 Medicago truncatula
Medtr5g078090 10.0kb downstream 10.0kb downstream 10000 false chr5: 33338857-33348856 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313145 5265 Fabidae View MSA
124050484 5270 Rosid View MSA
123749830 5271 Pentapetalae View MSA
122796003 5272 Eudicot View MSA
122051395 5273 Angiosperm View MSA
121343880 5274 Embryophyte View MSA
123427926 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.833        
cufflinks 5.466        
cufflinks 5.048        
cufflinks 2.294       Low
cufflinks 6.276       High
cufflinks 1.575       Low
cufflinks 4.365        
cufflinks 4.831        
cufflinks 2.956        

0 Strain