Gene : Medtr5g079460 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10584:SF181 - PUTATIVE-RELATED Description:  pfkB family carbohydrate kinase
Genomic Order:  4375 Name:  ? Medtr5g079460
Secondary Identifier:  ? PAC:31087295
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3801 Medicago truncatula pathologic  
Mtruncatula PWY-4101 Medicago truncatula pathologic  
Mtruncatula PWY-621 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g079460 0.5kb upstream 0.5kb upstream 7182 true chr5: 33960433-33967614 Medicago truncatula
Medtr5g079460 0.5kb upstream 0.5kb upstream 500 false chr5: 33960433-33960932 Medicago truncatula
Medtr5g079460 0.5kb downstream 0.5kb downstream 7182 true chr5: 33960933-33968114 Medicago truncatula
Medtr5g079460 0.5kb downstream 0.5kb downstream 500 false chr5: 33967615-33968114 Medicago truncatula
Medtr5g079460 1.0kb upstream 1.0kb upstream 7682 true chr5: 33959933-33967614 Medicago truncatula
Medtr5g079460 1.0kb upstream 1.0kb upstream 1000 false chr5: 33959933-33960932 Medicago truncatula
Medtr5g079460 1.0kb downstream 1.0kb downstream 7682 true chr5: 33960933-33968614 Medicago truncatula
Medtr5g079460 1.0kb downstream 1.0kb downstream 1000 false chr5: 33967615-33968614 Medicago truncatula
Medtr5g079460 2.0kb upstream 2.0kb upstream 8682 true chr5: 33958933-33967614 Medicago truncatula
Medtr5g079460 2.0kb upstream 2.0kb upstream 2000 false chr5: 33958933-33960932 Medicago truncatula
Medtr5g079460 2.0kb downstream 2.0kb downstream 8682 true chr5: 33960933-33969614 Medicago truncatula
Medtr5g079460 2.0kb downstream 2.0kb downstream 2000 false chr5: 33967615-33969614 Medicago truncatula
Medtr5g079460 5.0kb upstream 5.0kb upstream 11682 true chr5: 33955933-33967614 Medicago truncatula
Medtr5g079460 5.0kb upstream 5.0kb upstream 5000 false chr5: 33955933-33960932 Medicago truncatula
Medtr5g079460 5.0kb downstream 5.0kb downstream 11682 true chr5: 33960933-33972614 Medicago truncatula
Medtr5g079460 5.0kb downstream 5.0kb downstream 5000 false chr5: 33967615-33972614 Medicago truncatula
Medtr5g079460 10.0kb upstream 10.0kb upstream 16682 true chr5: 33950933-33967614 Medicago truncatula
Medtr5g079460 10.0kb upstream 10.0kb upstream 10000 false chr5: 33950933-33960932 Medicago truncatula
Medtr5g079460 10.0kb downstream 10.0kb downstream 16682 true chr5: 33960933-33977614 Medicago truncatula
Medtr5g079460 10.0kb downstream 10.0kb downstream 10000 false chr5: 33967615-33977614 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299329 5265 Fabidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.313        
cufflinks 4.832       High
cufflinks 2.799        
cufflinks 0.279        
cufflinks 4.474       High
cufflinks 0.176       Low
cufflinks 0.317        
cufflinks 4.289       High
cufflinks 0.884        

0 Strain