Gene : Medtr5g079340 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Description:  EF hand calcium-binding family protein
Genomic Order:  4371 Name:  ? Medtr5g079340
Secondary Identifier:  ? PAC:31090754
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g079340 0.5kb upstream 0.5kb upstream 1527 true chr5: 33925389-33926915 Medicago truncatula
Medtr5g079340 0.5kb upstream 0.5kb upstream 500 false chr5: 33926416-33926915 Medicago truncatula
Medtr5g079340 0.5kb downstream 0.5kb downstream 1527 true chr5: 33924889-33926415 Medicago truncatula
Medtr5g079340 0.5kb downstream 0.5kb downstream 500 false chr5: 33924889-33925388 Medicago truncatula
Medtr5g079340 1.0kb upstream 1.0kb upstream 2027 true chr5: 33925389-33927415 Medicago truncatula
Medtr5g079340 1.0kb upstream 1.0kb upstream 1000 false chr5: 33926416-33927415 Medicago truncatula
Medtr5g079340 1.0kb downstream 1.0kb downstream 2027 true chr5: 33924389-33926415 Medicago truncatula
Medtr5g079340 1.0kb downstream 1.0kb downstream 1000 false chr5: 33924389-33925388 Medicago truncatula
Medtr5g079340 2.0kb upstream 2.0kb upstream 3027 true chr5: 33925389-33928415 Medicago truncatula
Medtr5g079340 2.0kb upstream 2.0kb upstream 2000 false chr5: 33926416-33928415 Medicago truncatula
Medtr5g079340 2.0kb downstream 2.0kb downstream 3027 true chr5: 33923389-33926415 Medicago truncatula
Medtr5g079340 2.0kb downstream 2.0kb downstream 2000 false chr5: 33923389-33925388 Medicago truncatula
Medtr5g079340 5.0kb upstream 5.0kb upstream 6027 true chr5: 33925389-33931415 Medicago truncatula
Medtr5g079340 5.0kb upstream 5.0kb upstream 5000 false chr5: 33926416-33931415 Medicago truncatula
Medtr5g079340 5.0kb downstream 5.0kb downstream 6027 true chr5: 33920389-33926415 Medicago truncatula
Medtr5g079340 5.0kb downstream 5.0kb downstream 5000 false chr5: 33920389-33925388 Medicago truncatula
Medtr5g079340 10.0kb upstream 10.0kb upstream 11027 true chr5: 33925389-33936415 Medicago truncatula
Medtr5g079340 10.0kb upstream 10.0kb upstream 10000 false chr5: 33926416-33936415 Medicago truncatula
Medtr5g079340 10.0kb downstream 10.0kb downstream 11027 true chr5: 33915389-33926415 Medicago truncatula
Medtr5g079340 10.0kb downstream 10.0kb downstream 10000 false chr5: 33915389-33925388 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296506 5265 Fabidae View MSA
124061812 5270 Rosid View MSA
123752217 5271 Pentapetalae View MSA
122794850 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.191       Low
cufflinks 11.077     High  
cufflinks 23.594     High  
cufflinks 20.001     High  
cufflinks 19.866     High  
cufflinks 50.777     High High
cufflinks 37.047     High  
cufflinks 10.337     High  
cufflinks 36.116     High  

0 Strain