Gene : Medtr5g078750 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33270:SF5 - GB Description:  senescence-associated protein, putative
Genomic Order:  4342 Name:  ? Medtr5g078750
Secondary Identifier:  ? PAC:31091565
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g078750 0.5kb upstream 0.5kb upstream 3324 true chr5: 33651585-33654908 Medicago truncatula
Medtr5g078750 0.5kb upstream 0.5kb upstream 500 false chr5: 33654409-33654908 Medicago truncatula
Medtr5g078750 0.5kb downstream 0.5kb downstream 3324 true chr5: 33651085-33654408 Medicago truncatula
Medtr5g078750 0.5kb downstream 0.5kb downstream 500 false chr5: 33651085-33651584 Medicago truncatula
Medtr5g078750 1.0kb upstream 1.0kb upstream 3824 true chr5: 33651585-33655408 Medicago truncatula
Medtr5g078750 1.0kb upstream 1.0kb upstream 1000 false chr5: 33654409-33655408 Medicago truncatula
Medtr5g078750 1.0kb downstream 1.0kb downstream 3824 true chr5: 33650585-33654408 Medicago truncatula
Medtr5g078750 1.0kb downstream 1.0kb downstream 1000 false chr5: 33650585-33651584 Medicago truncatula
Medtr5g078750 2.0kb upstream 2.0kb upstream 4824 true chr5: 33651585-33656408 Medicago truncatula
Medtr5g078750 2.0kb upstream 2.0kb upstream 2000 false chr5: 33654409-33656408 Medicago truncatula
Medtr5g078750 2.0kb downstream 2.0kb downstream 4824 true chr5: 33649585-33654408 Medicago truncatula
Medtr5g078750 2.0kb downstream 2.0kb downstream 2000 false chr5: 33649585-33651584 Medicago truncatula
Medtr5g078750 5.0kb upstream 5.0kb upstream 7824 true chr5: 33651585-33659408 Medicago truncatula
Medtr5g078750 5.0kb upstream 5.0kb upstream 5000 false chr5: 33654409-33659408 Medicago truncatula
Medtr5g078750 5.0kb downstream 5.0kb downstream 7824 true chr5: 33646585-33654408 Medicago truncatula
Medtr5g078750 5.0kb downstream 5.0kb downstream 5000 false chr5: 33646585-33651584 Medicago truncatula
Medtr5g078750 10.0kb upstream 10.0kb upstream 12824 true chr5: 33651585-33664408 Medicago truncatula
Medtr5g078750 10.0kb upstream 10.0kb upstream 10000 false chr5: 33654409-33664408 Medicago truncatula
Medtr5g078750 10.0kb downstream 10.0kb downstream 12824 true chr5: 33641585-33654408 Medicago truncatula
Medtr5g078750 10.0kb downstream 10.0kb downstream 10000 false chr5: 33641585-33651584 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289145 5265 Fabidae View MSA
124029246 5270 Rosid View MSA
123749588 5271 Pentapetalae View MSA
122797585 5272 Eudicot View MSA
122049795 5273 Angiosperm View MSA
121311591 5274 Embryophyte View MSA
123348867 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain