Gene : Medtr5g078300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31448:SF3 - IFA-BINDING PROTEIN Description:  zein-binding protein
Genomic Order:  4315 Name:  ? Medtr5g078300
Secondary Identifier:  ? PAC:31091483
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g078300 0.5kb upstream 0.5kb upstream 4197 true chr5: 33461840-33466036 Medicago truncatula
Medtr5g078300 0.5kb upstream 0.5kb upstream 500 false chr5: 33461840-33462339 Medicago truncatula
Medtr5g078300 0.5kb downstream 0.5kb downstream 4197 true chr5: 33462340-33466536 Medicago truncatula
Medtr5g078300 0.5kb downstream 0.5kb downstream 500 false chr5: 33466037-33466536 Medicago truncatula
Medtr5g078300 1.0kb upstream 1.0kb upstream 4697 true chr5: 33461340-33466036 Medicago truncatula
Medtr5g078300 1.0kb upstream 1.0kb upstream 1000 false chr5: 33461340-33462339 Medicago truncatula
Medtr5g078300 1.0kb downstream 1.0kb downstream 4697 true chr5: 33462340-33467036 Medicago truncatula
Medtr5g078300 1.0kb downstream 1.0kb downstream 1000 false chr5: 33466037-33467036 Medicago truncatula
Medtr5g078300 2.0kb upstream 2.0kb upstream 5697 true chr5: 33460340-33466036 Medicago truncatula
Medtr5g078300 2.0kb upstream 2.0kb upstream 2000 false chr5: 33460340-33462339 Medicago truncatula
Medtr5g078300 2.0kb downstream 2.0kb downstream 5697 true chr5: 33462340-33468036 Medicago truncatula
Medtr5g078300 2.0kb downstream 2.0kb downstream 2000 false chr5: 33466037-33468036 Medicago truncatula
Medtr5g078300 5.0kb upstream 5.0kb upstream 8697 true chr5: 33457340-33466036 Medicago truncatula
Medtr5g078300 5.0kb upstream 5.0kb upstream 5000 false chr5: 33457340-33462339 Medicago truncatula
Medtr5g078300 5.0kb downstream 5.0kb downstream 8697 true chr5: 33462340-33471036 Medicago truncatula
Medtr5g078300 5.0kb downstream 5.0kb downstream 5000 false chr5: 33466037-33471036 Medicago truncatula
Medtr5g078300 10.0kb upstream 10.0kb upstream 13697 true chr5: 33452340-33466036 Medicago truncatula
Medtr5g078300 10.0kb upstream 10.0kb upstream 10000 false chr5: 33452340-33462339 Medicago truncatula
Medtr5g078300 10.0kb downstream 10.0kb downstream 13697 true chr5: 33462340-33476036 Medicago truncatula
Medtr5g078300 10.0kb downstream 10.0kb downstream 10000 false chr5: 33466037-33476036 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313978 5265 Fabidae View MSA
124070207 5270 Rosid View MSA
123753700 5271 Pentapetalae View MSA
122788125 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.676        
cufflinks 1.537        
cufflinks 1.754        
cufflinks 0.18       Low
cufflinks 1.888       High
cufflinks 0.179       Low
cufflinks 0.198        
cufflinks 2.299       High
cufflinks 0.226        

0 Strain