Gene : Medtr5g079710 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR33057:SF17 - GB Description:  ovate transcriptional repressor
Genomic Order:  4392 Name:  ? Medtr5g079710
Secondary Identifier:  ? PAC:31087771
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g079710 0.5kb upstream 0.5kb upstream 2820 true chr5: 34083230-34086049 Medicago truncatula
Medtr5g079710 0.5kb upstream 0.5kb upstream 500 false chr5: 34085550-34086049 Medicago truncatula
Medtr5g079710 0.5kb downstream 0.5kb downstream 2820 true chr5: 34082730-34085549 Medicago truncatula
Medtr5g079710 0.5kb downstream 0.5kb downstream 500 false chr5: 34082730-34083229 Medicago truncatula
Medtr5g079710 1.0kb upstream 1.0kb upstream 3320 true chr5: 34083230-34086549 Medicago truncatula
Medtr5g079710 1.0kb upstream 1.0kb upstream 1000 false chr5: 34085550-34086549 Medicago truncatula
Medtr5g079710 1.0kb downstream 1.0kb downstream 3320 true chr5: 34082230-34085549 Medicago truncatula
Medtr5g079710 1.0kb downstream 1.0kb downstream 1000 false chr5: 34082230-34083229 Medicago truncatula
Medtr5g079710 2.0kb upstream 2.0kb upstream 4320 true chr5: 34083230-34087549 Medicago truncatula
Medtr5g079710 2.0kb upstream 2.0kb upstream 2000 false chr5: 34085550-34087549 Medicago truncatula
Medtr5g079710 2.0kb downstream 2.0kb downstream 4320 true chr5: 34081230-34085549 Medicago truncatula
Medtr5g079710 2.0kb downstream 2.0kb downstream 2000 false chr5: 34081230-34083229 Medicago truncatula
Medtr5g079710 5.0kb upstream 5.0kb upstream 7320 true chr5: 34083230-34090549 Medicago truncatula
Medtr5g079710 5.0kb upstream 5.0kb upstream 5000 false chr5: 34085550-34090549 Medicago truncatula
Medtr5g079710 5.0kb downstream 5.0kb downstream 7320 true chr5: 34078230-34085549 Medicago truncatula
Medtr5g079710 5.0kb downstream 5.0kb downstream 5000 false chr5: 34078230-34083229 Medicago truncatula
Medtr5g079710 10.0kb upstream 10.0kb upstream 12320 true chr5: 34083230-34095549 Medicago truncatula
Medtr5g079710 10.0kb upstream 10.0kb upstream 10000 false chr5: 34085550-34095549 Medicago truncatula
Medtr5g079710 10.0kb downstream 10.0kb downstream 12320 true chr5: 34073230-34085549 Medicago truncatula
Medtr5g079710 10.0kb downstream 10.0kb downstream 10000 false chr5: 34073230-34083229 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.163        
cufflinks 0.213        
cufflinks 0.233        
cufflinks 0.021     Low Low
cufflinks 0.542       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low Low
cufflinks 0.275        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain