Gene : Medtr5g067410 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13812//PTHR13812:SF20 - ORNITHINE CYCLODEAMINASE-RELATED Description:  glutamyl-tRNA reductase
Genomic Order:  3630 Name:  ? Medtr5g067410
Secondary Identifier:  ? PAC:31087871
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5188 Medicago truncatula pathologic  
Mtruncatula PWY-5918 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g067410 0.5kb upstream 0.5kb upstream 3425 true chr5: 28475926-28479350 Medicago truncatula
Medtr5g067410 0.5kb upstream 0.5kb upstream 500 false chr5: 28478851-28479350 Medicago truncatula
Medtr5g067410 0.5kb downstream 0.5kb downstream 3425 true chr5: 28475426-28478850 Medicago truncatula
Medtr5g067410 0.5kb downstream 0.5kb downstream 500 false chr5: 28475426-28475925 Medicago truncatula
Medtr5g067410 1.0kb upstream 1.0kb upstream 3925 true chr5: 28475926-28479850 Medicago truncatula
Medtr5g067410 1.0kb upstream 1.0kb upstream 1000 false chr5: 28478851-28479850 Medicago truncatula
Medtr5g067410 1.0kb downstream 1.0kb downstream 3925 true chr5: 28474926-28478850 Medicago truncatula
Medtr5g067410 1.0kb downstream 1.0kb downstream 1000 false chr5: 28474926-28475925 Medicago truncatula
Medtr5g067410 2.0kb upstream 2.0kb upstream 4925 true chr5: 28475926-28480850 Medicago truncatula
Medtr5g067410 2.0kb upstream 2.0kb upstream 2000 false chr5: 28478851-28480850 Medicago truncatula
Medtr5g067410 2.0kb downstream 2.0kb downstream 4925 true chr5: 28473926-28478850 Medicago truncatula
Medtr5g067410 2.0kb downstream 2.0kb downstream 2000 false chr5: 28473926-28475925 Medicago truncatula
Medtr5g067410 5.0kb upstream 5.0kb upstream 7925 true chr5: 28475926-28483850 Medicago truncatula
Medtr5g067410 5.0kb upstream 5.0kb upstream 5000 false chr5: 28478851-28483850 Medicago truncatula
Medtr5g067410 5.0kb downstream 5.0kb downstream 7925 true chr5: 28470926-28478850 Medicago truncatula
Medtr5g067410 5.0kb downstream 5.0kb downstream 5000 false chr5: 28470926-28475925 Medicago truncatula
Medtr5g067410 10.0kb upstream 10.0kb upstream 12925 true chr5: 28475926-28488850 Medicago truncatula
Medtr5g067410 10.0kb upstream 10.0kb upstream 10000 false chr5: 28478851-28488850 Medicago truncatula
Medtr5g067410 10.0kb downstream 10.0kb downstream 12925 true chr5: 28465926-28478850 Medicago truncatula
Medtr5g067410 10.0kb downstream 10.0kb downstream 10000 false chr5: 28465926-28475925 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308158 5265 Fabidae View MSA
124065838 5270 Rosid View MSA
123737748 5271 Pentapetalae View MSA
122790191 5272 Eudicot View MSA
122042343 5273 Angiosperm View MSA
121344593 5274 Embryophyte View MSA
123424931 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.598        
cufflinks 99.265     High  
cufflinks 57.444     High  
cufflinks 0.033     Low Low
cufflinks 103.096     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.082       Low
cufflinks 90.075     High  
cufflinks 0.081     Low Low

0 Strain