Gene : Medtr5g067460 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11206:SF92 - MATE EFFLUX FAMILY PROTEIN Description:  MATE efflux family protein
Genomic Order:  3633 Name:  ? Medtr5g067460
Secondary Identifier:  ? PAC:31089125
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g067460 0.5kb upstream 0.5kb upstream 2802 true chr5: 28504873-28507674 Medicago truncatula
Medtr5g067460 0.5kb upstream 0.5kb upstream 500 false chr5: 28507175-28507674 Medicago truncatula
Medtr5g067460 0.5kb downstream 0.5kb downstream 2802 true chr5: 28504373-28507174 Medicago truncatula
Medtr5g067460 0.5kb downstream 0.5kb downstream 500 false chr5: 28504373-28504872 Medicago truncatula
Medtr5g067460 1.0kb upstream 1.0kb upstream 3302 true chr5: 28504873-28508174 Medicago truncatula
Medtr5g067460 1.0kb upstream 1.0kb upstream 1000 false chr5: 28507175-28508174 Medicago truncatula
Medtr5g067460 1.0kb downstream 1.0kb downstream 3302 true chr5: 28503873-28507174 Medicago truncatula
Medtr5g067460 1.0kb downstream 1.0kb downstream 1000 false chr5: 28503873-28504872 Medicago truncatula
Medtr5g067460 2.0kb upstream 2.0kb upstream 4302 true chr5: 28504873-28509174 Medicago truncatula
Medtr5g067460 2.0kb upstream 2.0kb upstream 2000 false chr5: 28507175-28509174 Medicago truncatula
Medtr5g067460 2.0kb downstream 2.0kb downstream 4302 true chr5: 28502873-28507174 Medicago truncatula
Medtr5g067460 2.0kb downstream 2.0kb downstream 2000 false chr5: 28502873-28504872 Medicago truncatula
Medtr5g067460 5.0kb upstream 5.0kb upstream 7302 true chr5: 28504873-28512174 Medicago truncatula
Medtr5g067460 5.0kb upstream 5.0kb upstream 5000 false chr5: 28507175-28512174 Medicago truncatula
Medtr5g067460 5.0kb downstream 5.0kb downstream 7302 true chr5: 28499873-28507174 Medicago truncatula
Medtr5g067460 5.0kb downstream 5.0kb downstream 5000 false chr5: 28499873-28504872 Medicago truncatula
Medtr5g067460 10.0kb upstream 10.0kb upstream 12302 true chr5: 28504873-28517174 Medicago truncatula
Medtr5g067460 10.0kb upstream 10.0kb upstream 10000 false chr5: 28507175-28517174 Medicago truncatula
Medtr5g067460 10.0kb downstream 10.0kb downstream 12302 true chr5: 28494873-28507174 Medicago truncatula
Medtr5g067460 10.0kb downstream 10.0kb downstream 10000 false chr5: 28494873-28504872 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313961 5265 Fabidae View MSA
124064495 5270 Rosid View MSA
123738593 5271 Pentapetalae View MSA
122792210 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.949       Low
cufflinks 3.528        
cufflinks 4.65        
cufflinks 0.479       Low
cufflinks 4.575        
cufflinks 2.545        
cufflinks 2.451        
cufflinks 4.192        
cufflinks 1.468        

0 Strain