Gene : Medtr5g067430 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Description:  TATA box-binding protein associated factor RNA polymerase I subunit B-like protein
Genomic Order:  3631 Name:  ? Medtr5g067430
Secondary Identifier:  ? PAC:31088788
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g067430 0.5kb upstream 0.5kb upstream 5104 true chr5: 28483254-28488357 Medicago truncatula
Medtr5g067430 0.5kb upstream 0.5kb upstream 500 false chr5: 28483254-28483753 Medicago truncatula
Medtr5g067430 0.5kb downstream 0.5kb downstream 5104 true chr5: 28483754-28488857 Medicago truncatula
Medtr5g067430 0.5kb downstream 0.5kb downstream 500 false chr5: 28488358-28488857 Medicago truncatula
Medtr5g067430 1.0kb upstream 1.0kb upstream 5604 true chr5: 28482754-28488357 Medicago truncatula
Medtr5g067430 1.0kb upstream 1.0kb upstream 1000 false chr5: 28482754-28483753 Medicago truncatula
Medtr5g067430 1.0kb downstream 1.0kb downstream 5604 true chr5: 28483754-28489357 Medicago truncatula
Medtr5g067430 1.0kb downstream 1.0kb downstream 1000 false chr5: 28488358-28489357 Medicago truncatula
Medtr5g067430 2.0kb upstream 2.0kb upstream 6604 true chr5: 28481754-28488357 Medicago truncatula
Medtr5g067430 2.0kb upstream 2.0kb upstream 2000 false chr5: 28481754-28483753 Medicago truncatula
Medtr5g067430 2.0kb downstream 2.0kb downstream 6604 true chr5: 28483754-28490357 Medicago truncatula
Medtr5g067430 2.0kb downstream 2.0kb downstream 2000 false chr5: 28488358-28490357 Medicago truncatula
Medtr5g067430 5.0kb upstream 5.0kb upstream 9604 true chr5: 28478754-28488357 Medicago truncatula
Medtr5g067430 5.0kb upstream 5.0kb upstream 5000 false chr5: 28478754-28483753 Medicago truncatula
Medtr5g067430 5.0kb downstream 5.0kb downstream 9604 true chr5: 28483754-28493357 Medicago truncatula
Medtr5g067430 5.0kb downstream 5.0kb downstream 5000 false chr5: 28488358-28493357 Medicago truncatula
Medtr5g067430 10.0kb upstream 10.0kb upstream 14604 true chr5: 28473754-28488357 Medicago truncatula
Medtr5g067430 10.0kb upstream 10.0kb upstream 10000 false chr5: 28473754-28483753 Medicago truncatula
Medtr5g067430 10.0kb downstream 10.0kb downstream 14604 true chr5: 28483754-28498357 Medicago truncatula
Medtr5g067430 10.0kb downstream 10.0kb downstream 10000 false chr5: 28488358-28498357 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306407 5265 Fabidae View MSA
124065937 5270 Rosid View MSA
123742102 5271 Pentapetalae View MSA
122796533 5272 Eudicot View MSA
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.398        
cufflinks 0.439        
cufflinks 0.577        
cufflinks 0.139        
cufflinks 0.561        
cufflinks 0.05     Low Low
cufflinks 0.275        
cufflinks 0.452        
cufflinks 0.224        

0 Strain